LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g1953	ATGCAGGGGAGACAAAACGACACCGTAATGGAACAAATTCTTAAAGCCACAGACACAGAGTCCTCAAAAAACGGCGTCGTTTTGTTCGGCAAATACGAGCTCCTCGAGCTTCTAGGCGTAGGCGCGTCGGCGAAAGTGTACCACGCGCGGCGCGTTGACACAGGAGAGAGCGTGGCGGTTAAGGCCGTTAGCAAGCGCAACCTCTGCAACGGAAACGGTTACGCGGCGCACGTTGAGCGCGAGGTTGCTATCATGCGCCGGCTGCGCCATCCACACACCGTGAGGATCTACGAGGTCCTCGCCACAAAGACCAAGATCTACTTCATCATGGAGTTCGCCGCCGGCGGTGAGCTCCTCCGCCGTGTCACCACCGCCGGCCGCATGACGGAGCATCTCGCCCGTCGGTACTTCCGGCAACTGATCTCCGCCGTCAGGTACTGCCACAGCCGCGGCGTCTACCACCGCGATCTCAAGCTCGAGAATCTCCTCGTCGACGAGAACATGGACCTCAAAGTCTCGGATTTCGGGTTGAGTGCGAGTCGGGCCGAGACCCGACCCGATGGATTGTTCCACACGATTTGTGGAACACCTGCTTACGTGGCACCGGAGATTCTAGCTAGGAAAGGTTACGATGGTGCCAGCGTGGATATTTGGTCATGCGGCGTCGTTTTGTTCGCTCTCGTTGCTGGCTATTTACCTTTCAATGACTATAATTTAACGGTTTTGTATAGGAAGATTTATAGGGGCCAATTTCGGTTCCCTAAGTGGGTGTCACGTGAGTTTAGGAACATGGTCACGTGCATGTTGGACCCGAATCCCGAGACGAGGATTACTGTTGAGGGGATCACGAGGGATCCATGGTTTTGTTGGGGCGAGTTCAAAGAGATTCGGGTTTGGACTGAGAATGAAGATGAGGATCAAGTTGCAATGAAAAAATTGAATGCATTTGATCTGATTTTGTTCTCGTCCGGGCTTGATATGTCAGGATTATTGATTGGTTTGGAGGATTTGGATTGCGTCGATCGGTTTATTTTGGGGGAGTCGGCGGGGAATGTGGTGGAGAAGGTGGAAGAGGCGGTGGAGACGAGAAAGAATGTGGTTGTGAAGAGGGAGGAGAGTGGTTGTGGAGGAGTGAGGTTGGAGGGGTTGGATGGTAATTTTGTTATTATGGTTAGGGTTTACCAATTGACAAATGAGTTGGTTGTGGTTGAAGTAAAAAGAAAAGAAAGAGGAATGAAGAGTGGTTGTGCTGAGTTTTGGAGCAATGTGTTGAGGCCTTTATTTCTTGCATTGGCTAGTGAAACAAAAACTCCAACATTAGGACATTCAAATTGA	1335	0.5109	MQGRQNDTVMEQILKATDTESSKNGVVLFGKYELLELLGVGASAKVYHARRVDTGESVAVKAVSKRNLCNGNGYAAHVEREVAIMRRLRHPHTVRIYEVLATKTKIYFIMEFAAGGELLRRVTTAGRMTEHLARRYFRQLISAVRYCHSRGVYHRDLKLENLLVDENMDLKVSDFGLSASRAETRPDGLFHTICGTPAYVAPEILARKGYDGASVDIWSCGVVLFALVAGYLPFNDYNLTVLYRKIYRGQFRFPKWVSREFRNMVTCMLDPNPETRITVEGITRDPWFCWGEFKEIRVWTENEDEDQVAMKKLNAFDLILFSSGLDMSGLLIGLEDLDCVDRFILGESAGNVVEKVEEAVETRKNVVVKREESGCGGVRLEGLDGNFVIMVRVYQLTNELVVVEVKRKERGMKSGCAEFWSNVLRPLFLALASETKTPTLGHSN*	445

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev02g1953	444	ProSiteProfiles	Protein kinase domain profile.	32	288	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev02g1953	444	CDD	CIPK_C	314	427	-	-
Aev02g1953	444	ProSitePatterns	Protein kinases ATP-binding region signature.	38	61	IPR017441	GO:0005524
Aev02g1953	444	Gene3D	Kinase associated domain 1, KA1	308	432	-	-
Aev02g1953	444	SMART	serkin_6	32	288	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev02g1953	444	Pfam	NAF domain	311	363	IPR004041	GO:0007165
Aev02g1953	444	Gene3D	Transferase(Phosphotransferase) domain 1	113	290	-	-
Aev02g1953	444	Gene3D	Phosphorylase Kinase; domain 1	21	112	-	-
Aev02g1953	444	PANTHER	-	14	436	-	-
Aev02g1953	444	Pfam	Protein kinase domain	32	288	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g1953	Aev-Chr2	21321661	21322995	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev02g1953	21	437	CBL-interacting serine-threonine protein kinases	AT2G30360	51.651	9.75e-154	441

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Aev02g1953		Pkinase	8.7e-68	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g1953	-		K12761	gmx:100788245	499.975

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