Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1935 ATGTCTTCAAGAGGGAGAAAAAAAGCTATGCAACGCATGTTGCAACAACTTCGATCAGCCACAAATTCCACTGCTATGAACAAAGCCTCAATTATTGTGGATGCTACCAAATACATTGAGGACTTGAAGCAAAAAGTTGAGGGGCTGAATACAGAGCTAGAAACCGGTGAATCATCAACATCTCAAGATGAATTACCTATGGTCACGGTAGAAACCCTAGAAAGGGGTTTCCTCATAAATGTGTTTTCAGAGAGGAATTGCCCCAACATGCTTGTGGCAATACTTGATGCCTTTGAAGAACTTGGGCTTGACGTGCTTGATGCTAGGGTTTCTTGTGAAGACAATTTCCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGAATGAGAGCATCGATGCACAAGTTGTCAAGCAAGCAGTGATGCAAGCAATCAAGAACATGGATTGA 447 0.4273 MSSRGRKKAMQRMLQQLRSATNSTAMNKASIIVDATKYIEDLKQKVEGLNTELETGESSTSQDELPMVTVETLERGFLINVFSERNCPNMLVAILDAFEELGLDVLDARVSCEDNFQLEAVGGESQENESIDAQVVKQAVMQAIKNMD* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1935 148 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 55 IPR036638 GO:0046983
Aev02g1935 148 CDD ACT_UUR-ACR-like 88 144 - -
Aev02g1935 148 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 148 - -
Aev02g1935 148 Coils Coil 32 59 - -
Aev02g1935 148 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 148 - -
Aev02g1935 148 Gene3D - 1 58 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1935 Aev-Chr2 21197553 21200995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1935 - - aip:107628501 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1935 02 21197553 21200995 Aev07g2178 07 22860182 22862204 ECH
Aev02g1935 02 21197553 21200995 Aev03g0971 03 8056572 8060459 ECH
Aev02g1935 02 21197553 21200995 Aev02g1935 02 21197553 21200995 ECH