Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1931 ATGCAAGCAAGGGCAAGTGTTGGAGATGGTTTTCGTGTTAGCGTGGCGAGTACACCTAGCACTATAAGCAATGGAGGGTCAGAACATGATGATGCAGAGTCACAACAGGGTGATATTTATGTTTGGGGAGAGGTTCTGTCAGATTCAGCAAATGGGAATTGTTCCAAAATAGATGTGTTGGTTCCTAAGCTCTTAGAGTCAAATTTGGTACTTGATATTCATCACATTACATCTGGTGTGAATCACATTGTTATAGTAACTAAGAAAGGAGAATTATTCACTTGGGGAGAAGAATTCGGAGGGAAACTCGATCACAGAATCGACAGAGAGTATTCAGGACGGCTCCGTCTGATTGAATCCTTAGAAGTTCCTAATAGTTTTGTGCATGCCACATGTGGAGAGTATCACATGTGTGCTATATCTTACTCTAATGATTTTTTCACATGGGGTGATGCTACTTATAGTGCTTCACTTCTTGGACATGGTTGTGATACTAGCCATTTGATGTGGAAGAGGATTGAAGGTCCATTGGAGGGGCTTCAAGTTGTGTCTATTTCGTGTGGCACGTGGCATTCGGCATTGACAACCGCGGATGGGAAACTATTTACCTTCGGCGAGGGAGCGTTTGGTGTACTAGGACATGGTGATCAAGAGAGTGTCATGTATCCAAAAGAGGTACAATTGTTGAGTGGATTGAAGGCTATTAAGGTTGCTTGTGGAGTTTGGCACACTGCAGCTATCATAGAAGTTATGTATCAGTCAGGCGGATCAAATGTTTCGCCGTGGAAGCTCTTCACTTGGGGCGATGGCGATAAACACCGATTAGGCCATGGAAACAATGAGACATACCTTCAACCGACTCGAGTCGCGTCGCTTATTGAGTATAATTTCCATCAGGTAGCATGTGGACATACCATGACTGTTGCTCTCACTACATCAGGTCATGTTTTCACAATGGGAGACACCAAATTCGGCCAACTCGGAAACCCTGTTTCGGCCGGAAAAGTACCTACACTAGTCCAAGATAAGTTGCTTGGTGAGTTTGTTGAGGAAATATCATGCGGAGCAAATCATGTCGCCGCATTGACATCGAAAAATGAACTATATACTTGGGGAAAGGGTGCTAATGGAAGACTAGGACATGGTGACTTGGAAGACAAGAAATCTCCAACATTGGTTTTAGCATTAAAAGATAGGCATGTGAAGAATATCTCATGTGGCTCAAAGTTCACATCTTGTATATGCATCCATAAATTGGTCCCGGTAAGTGACCAAACAGTTTGTTCCGGTTGTCGACAAGCATTCGGATTCATGACCAAGAAGCACAACTGCAACAACTGTGGATTGGCTTTCTGCCATCCTTACCATGGAGTATCAAGGTCTACTACATCAAGAACTCTGTTGTGTCCAAGGACGAAACCGATGAACTACCTTGAGATCAAGAATAGCAAATCTGGAAGCAGTTATGGATCTACTTCAATTGTTAGGGCATCACAAGTTCCATCACTTATACAACTGAAAGATATTGAGTTTCCAAGTTCACTTAGTGCTTTTCAGTCTGCTTTGAAGCCTCTTATACCTCAAACTACTGCACTTCAGACACTGTCTTCAAATTCAAATTCAAGACCAACATCTCCAATCACAAGAAGACTGAGCCCGCGTTCCGTCAGTCCTAGATTTTCTGGAAATTATGTGGATACTTTGAGAAAGACGAGCGAGCGTTTGAACCAAGAAATCTCCAAATTGCAGAACCAAGTTCAGAGTCTGAAGCTGAGGAATGACACATTAGAAATGGAAAATCAGAGGCTTCAGAAAAATGCAACAGAAGCTTCAGCCTTAGCTGCAGTGGAATTTTCTCATCTTTTGACAGCAAAAGAATTTATTGAATCAACCGAAAATCAGTTGAAGAAAATGTCAGAGAAGTTCACAGAAGAAACTCAAGACAGTGAAATTTTGAGAACCATTCAAACCCAAGCAGGAGATATTCTGAGAGAAATTTCAGAATCTGAAACTAATTGCTCACCACCAAAGTTGGATTCTGAGCAGAACACTTCAAGATTGCAACAACAGTTAGTAGAAGAAAATGCTGCTATTGCAAGTGTTGATCCATCTAAGTCTGAAGAAAGTGTTCTTCAAGAAAGTAATGAATCAAAATTGGATTCTGAGGAAGAAAAACAACACAATGAACCTATCATTATACCAGAGAATAATGTAGATGCAGCACAAATTGATCAATTGCAACAAGAAATTAGTAATGGATCAAAGTTGGAAGCAGAACATCAAAATTCACTAGAAGAAAATGCTGAAAATACCATTCAAGAAAACAATGGATCAAATTTGGAATTACCTGATAATAATGAAACTACTCCATCTAGTACTGTCTCTCCTAAACCACAAGAACAAGAAAGAATAAATGAAGATGCAAAAAACCATGTTGGAGCTGGAAATAGTAATAATGCACTTCAAGAGAGTAAAGGAAAATCTGTGTCTAATAATGGAGCAACAATAATGGCTCAAAAAAGTATGGAATATGGTTCTAGATCACTAGAATCTTCAAGATCAGGGAAACATGGAGAAACACAAGTCATTGAACAGTTTGAGCCTGGTGTTTTTGTTACACTTGTGTTAATGCCTGATGGTACAAGAGTCTTCAAAAGAGTTAGATTCAGCAAGAGAAAGTTCATTAAAAGTGAAGCAGAAGAATGGTGGAGCCAAAACAAAATTAGGGTGCTAAGGCAATACTTTCAAACTCAAAAGCAAACACAAGGATCATCTAACATCTCATCACCTCCTCATGCCAATGAACATATTGAAACATCATCATCTTCAACAACTTCACCTTAA 2844 0.4001 MQARASVGDGFRVSVASTPSTISNGGSEHDDAESQQGDIYVWGEVLSDSANGNCSKIDVLVPKLLESNLVLDIHHITSGVNHIVIVTKKGELFTWGEEFGGKLDHRIDREYSGRLRLIESLEVPNSFVHATCGEYHMCAISYSNDFFTWGDATYSASLLGHGCDTSHLMWKRIEGPLEGLQVVSISCGTWHSALTTADGKLFTFGEGAFGVLGHGDQESVMYPKEVQLLSGLKAIKVACGVWHTAAIIEVMYQSGGSNVSPWKLFTWGDGDKHRLGHGNNETYLQPTRVASLIEYNFHQVACGHTMTVALTTSGHVFTMGDTKFGQLGNPVSAGKVPTLVQDKLLGEFVEEISCGANHVAALTSKNELYTWGKGANGRLGHGDLEDKKSPTLVLALKDRHVKNISCGSKFTSCICIHKLVPVSDQTVCSGCRQAFGFMTKKHNCNNCGLAFCHPYHGVSRSTTSRTLLCPRTKPMNYLEIKNSKSGSSYGSTSIVRASQVPSLIQLKDIEFPSSLSAFQSALKPLIPQTTALQTLSSNSNSRPTSPITRRLSPRSVSPRFSGNYVDTLRKTSERLNQEISKLQNQVQSLKLRNDTLEMENQRLQKNATEASALAAVEFSHLLTAKEFIESTENQLKKMSEKFTEETQDSEILRTIQTQAGDILREISESETNCSPPKLDSEQNTSRLQQQLVEENAAIASVDPSKSEESVLQESNESKLDSEEEKQHNEPIIIPENNVDAAQIDQLQQEISNGSKLEAEHQNSLEENAENTIQENNGSNLELPDNNETTPSSTVSPKPQEQERINEDAKNHVGAGNSNNALQESKGKSVSNNGATIMAQKSMEYGSRSLESSRSGKHGETQVIEQFEPGVFVTLVLMPDGTRVFKRVRFSKRKFIKSEAEEWWSQNKIRVLRQYFQTQKQTQGSSNISSPPHANEHIETSSSSTTSP* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1931 947 Coils Coil 628 648 - -
Aev02g1931 947 PRINTS Chromosome condensation regulator RCC1 signature 303 321 IPR000408 -
Aev02g1931 947 PRINTS Chromosome condensation regulator RCC1 signature 201 215 IPR000408 -
Aev02g1931 947 PRINTS Chromosome condensation regulator RCC1 signature 144 160 IPR000408 -
Aev02g1931 947 PRINTS Chromosome condensation regulator RCC1 signature 361 382 IPR000408 -
Aev02g1931 947 PRINTS Chromosome condensation regulator RCC1 signature 185 201 IPR000408 -
Aev02g1931 947 MobiDBLite consensus disorder prediction 811 831 - -
Aev02g1931 947 Coils Coil 565 613 - -
Aev02g1931 947 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 463 684 - -
Aev02g1931 947 Pfam FYVE zinc finger 420 454 IPR000306 GO:0046872
Aev02g1931 947 MobiDBLite consensus disorder prediction 697 736 - -
Aev02g1931 947 ProSiteProfiles BRX domain profile. 860 915 IPR013591 -
Aev02g1931 947 SUPERFAMILY FYVE/PHD zinc finger 420 457 IPR011011 -
Aev02g1931 947 MobiDBLite consensus disorder prediction 775 831 - -
Aev02g1931 947 MobiDBLite consensus disorder prediction 533 562 - -
Aev02g1931 947 MobiDBLite consensus disorder prediction 709 730 - -
Aev02g1931 947 CDD bZIP 573 605 - -
Aev02g1931 947 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 314 365 IPR000408 -
Aev02g1931 947 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 199 250 IPR000408 -
Aev02g1931 947 Gene3D - 254 431 IPR009091 -
Aev02g1931 947 Gene3D - 13 253 IPR009091 -
Aev02g1931 947 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 453 - -
Aev02g1931 947 Pfam Regulator of chromosome condensation (RCC1) repeat 198 247 IPR000408 -
Aev02g1931 947 Pfam Regulator of chromosome condensation (RCC1) repeat 313 362 IPR000408 -
Aev02g1931 947 Pfam Regulator of chromosome condensation (RCC1) repeat 367 414 IPR000408 -
Aev02g1931 947 Pfam Regulator of chromosome condensation (RCC1) repeat 264 310 IPR000408 -
Aev02g1931 947 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 681 921 - -
Aev02g1931 947 Pfam Transcription factor regulating root and shoot growth via Pin3 860 914 IPR013591 -
Aev02g1931 947 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 90 143 IPR000408 -
Aev02g1931 947 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 144 198 IPR000408 -
Aev02g1931 947 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 681 921 - -
Aev02g1931 947 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 432 488 IPR013083 -
Aev02g1931 947 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 366 417 IPR000408 -
Aev02g1931 947 MobiDBLite consensus disorder prediction 920 947 - -
Aev02g1931 947 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 237 247 IPR000408 -
Aev02g1931 947 MobiDBLite consensus disorder prediction 775 799 - -
Aev02g1931 947 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 463 684 - -
Aev02g1931 947 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 262 313 IPR000408 -
Aev02g1931 947 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 1 453 - -
Aev02g1931 947 SUPERFAMILY RCC1/BLIP-II 29 418 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1931 Aev-Chr2 21148528 21152816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1931 859 915 Major Intrinsic Protein MIP AT1G31880 43.860 9.53e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1931 - - lang:109340921 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3049 06 32043382 32047109 Aev02g1931 02 21148528 21152816 PCT