Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1905 ATGGCCAATGATACAGTTTCTGGAAACAGGAAATCGTTCAAGAGGAGCAGGTGTGGAAGTGATTCTGTGGATGACACTCTTGAGAAGTGGAAGAAGTACAATGGCCAAAAAGGGGTGAAAGTGATTCACAAAGTTCCTGCAAAAGGGTCCAAAAAAGGGTGCATGAAAGGTAAAGGAGGGCCTCAGAACTCTGAATGCAATTACAGAGGTGTGAGACAGAGGATTTGGGGTAAATGGGTGGCCGAAATCCGTGAACCTATTAACCATAATAACGATAATAAGAAAGCGAAACGGCTTTGGCTAGGTACTTTCTCCACTGCAATTGAAGCTGCTCTTGCTTATGATGAAGCAGCTAAGGCCATGTATGGTCCTTGTGCAATTCTGAACTTTCCTGAGAGTGATTTGGAGTCCAGAGGATCAATTGAATCGCCAAGTCCGGATGAGGTCGGTAAAGATGGCGATTTGGAAGACGAACTGAATTGTTCTGAGGTTGGAGTTTTGGAGGAAACAAAGGAAGAACATGATCTTTCTAATGAGGTTTATGAGATGTGTGATGAAATAGCTTATCATGGGACAGTGAAGGATAATATTAAAGCCGAAATGCTAGGAGAAAGTGAAAGAATGGAGAGAGAATCAGAAGAGGTTTTGGAGCTTATGGATGCTATGAATACTGGAGCTAATTGTGGAGATTCTGATTCTACTGAAAGTGGGATTTCAGTGAAGAATGAACAAAAAATGGAAGAATCTAGGGAAAGTTTCACATCATGTGAGTTGAGTTGTATAAACCATTGTGATGGATACTTGCACAATAAGCTAACAGATGAGGATTGCAATCCAAAAGCTGATTATGATCATTTTAGAAACATGAAAAGTGAGGAAATTTTGGTGAAGAAACAAATGGAGGAAGTGATTTCTGAAATTCTAAGACTTTTTAGAAATAAGTTCTCAAAGGGTAGTCATATTCACTCACAAAATGAGCAACATGAACATAAACCTTGTGATAATGTTAAAGTTGAGATGACAGTAGAATCTGATATAGCACAACCTCGCGACCGCGACAGTCACGATTATAGTGTTGATGAGATAAAAAATGAGGTTGAAGGTTCAGATTACAAGCTAAGAAGAGTTCAGTGCACATCTACTTGTGATTATAAGGGAAATATAGTGGTGGAGTCAAGCCAGGGAATTGATCTGATTACTTCTGGCAATTATGGACCAACTGGAAAAATGTATGAGTTTGAAGCTTTGAAAATCAACAAGACTAATAGAAAACTTAAGTTGCAAGAAAAAGGAAATGGTGGAAATGTGTTATCTGGATTTAGTTCTAGGAAGCTATCTGAACATTTGAATAATTTGCAGGTTGCTGAGATAGAAATGGGAAATGATTACAGTTTCTTGAGACCTGACTATGATTTTGGATTATTGGAAGAGAAGAAGTTACTTGACTTATGCTTTTCACATGTAGAACCTTAG 1473 0.3849 MANDTVSGNRKSFKRSRCGSDSVDDTLEKWKKYNGQKGVKVIHKVPAKGSKKGCMKGKGGPQNSECNYRGVRQRIWGKWVAEIREPINHNNDNKKAKRLWLGTFSTAIEAALAYDEAAKAMYGPCAILNFPESDLESRGSIESPSPDEVGKDGDLEDELNCSEVGVLEETKEEHDLSNEVYEMCDEIAYHGTVKDNIKAEMLGESERMERESEEVLELMDAMNTGANCGDSDSTESGISVKNEQKMEESRESFTSCELSCINHCDGYLHNKLTDEDCNPKADYDHFRNMKSEEILVKKQMEEVISEILRLFRNKFSKGSHIHSQNEQHEHKPCDNVKVEMTVESDIAQPRDRDSHDYSVDEIKNEVEGSDYKLRRVQCTSTCDYKGNIVVESSQGIDLITSGNYGPTGKMYEFEALKINKTNRKLKLQEKGNGGNVLSGFSSRKLSEHLNNLQVAEIEMGNDYSFLRPDYDFGLLEEKKLLDLCFSHVEP* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1905 490 SMART rav1_2 67 137 IPR001471 GO:0003700|GO:0006355
Aev02g1905 490 Coils Coil 194 214 - -
Aev02g1905 490 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Aev02g1905 490 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Aev02g1905 490 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 313 - -
Aev02g1905 490 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 313 - -
Aev02g1905 490 Gene3D AP2/ERF domain 67 132 IPR036955 GO:0003700|GO:0006355
Aev02g1905 490 Pfam AP2 domain 66 123 IPR001471 GO:0003700|GO:0006355
Aev02g1905 490 MobiDBLite consensus disorder prediction 135 156 - -
Aev02g1905 490 ProSiteProfiles AP2/ERF domain profile. 67 131 IPR001471 GO:0003700|GO:0006355
Aev02g1905 490 MobiDBLite consensus disorder prediction 1 23 - -
Aev02g1905 490 CDD AP2 66 133 IPR001471 GO:0003700|GO:0006355
Aev02g1905 490 SUPERFAMILY DNA-binding domain 67 132 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1905 Aev-Chr2 20899610 20901511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1905 14 209 AP2-EREBP Transcription Factor Family AT2G40340 44.878 1.23e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev02g1905 AP2 8.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1905 - - aip:107625804 427.557