Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1885 ATGATGCACCCTGAATTTCTAGAGTTCCCATGGTCATCATCATCATTCTTTGAAGAAAATAGCTCAAGTTTTGAATTTGATCATCAATTTGGTCAATTTGTTGAGAGCTTTTACTTTGAAGTTGATGATGCACATGTGAGTGATTATAATGACCATAATAATTTGAACTACCCAATTGAGGAATTAGATTCCTTGCAACTCCCATCACTATTGGATTATGTGTCCATGGAATTGGATGATGAATTTGATCCCAATAACCTTGGTGCTAATAATAACCAAGTTATGGATTATATTCAATTTCAAGGGTACCATGAAGATCAAAGTGATGAGGGTACTACTAATAATAATTTTCCTTCACAAAATTTCTCATCAAGTGAAGGAGAATATGCTTGGAGTCCAACATCATCTATGAAATCAGATTTGACCTCATCTCAATTTCAACCATCACTACTAACTTTGCCTCAAGAAGGCATGGAAATTGACAAAAAAGTGGTGATTCCACACATGCTTGAAGCCTATGGTGAAGCCTTAAGCCAAGGCTATAAATCACTAGAAGAGGAGATTTTGAGATGCATAAGCCTTAAAGTTAGTCCAATTTCTCAAGAACCCCTTGAACGCCTTGCATTCTATTTGTGCAAAGATATTGCAAATTACCAAGGAGATTCTTATCTCACACAAGAGGCTAATAAGAATTTTGATTTTGCTTTCAAGGCTTTGTACCAAGGAACCCCATTTGGGAAAGTTCCTAACTTTGTTGCAAATTCATCAATTCTTGAGGCTATACCTCATGATTGTGAGGTTATACACATATTTGACTTTGATTTGGGAAATGGGGTTCAATGGCCTCCTATGATTGAGGCAATTGCAAGAATGGGGAAAAAATTGAAATTGACATCAATTAAATGGAGTGATGAGGGAATCTATGAATGTGATTCCACTTCATGGAATTTTGAGAAGACTAGAAAGAACCTCTATGATCATGCTAGATCTTGTGGTTTGGTGTTGAAGGTTGATGAGAAGGGTATGGAGGAATTGGTTTTGGAGCTTAAAAAAATGAACAAAAGGGAGGGTAAAAAGGACTTTTTGGCTTTCAATTGTATGGTGGGTCTTGCACATATGGGAAGAGAGAGAAGTAGAAAAAATGTCATTGACTTTCTAAATTTGATCAATAGTAGTGGTTGTGAAAACAGGGGAATTGTGACTTTTGGTGATGGAGGTGCCTATGAGAAATTGAAAAATGGATTAAACTTTAGGTCATTTTATAATGGACATTTGGTTCATTATAAGGCCTTGTTAGATTCATTTGAGTCACATTTCCCAACAAGATTCTTAGAGGCAAGAACTTGCATTGAGTCCATTTTTGTGGGACCTAATGTCTCTTCTCATGGTTGGTTACAAAATTGGCAAGAGATGATAAGAGAGGTTTCAAATCTTCAAGCAGAGATTGGGTTAGAGGGTAACAAATTAAGCAATGAAATTTTGATGGAAGTAAAAGAGATATTGAAAGGGTATGAGGGTAATTGTAATTCATATGAGGCCAAGATTGAGGGGCGAAATGGTAATAATTTGGTTTTACATTGGAAAGGAATTCAGCTAGTAAGAGTTTCAACATGGAGGAAGTAA 1623 0.3604 MMHPEFLEFPWSSSSFFEENSSSFEFDHQFGQFVESFYFEVDDAHVSDYNDHNNLNYPIEELDSLQLPSLLDYVSMELDDEFDPNNLGANNNQVMDYIQFQGYHEDQSDEGTTNNNFPSQNFSSSEGEYAWSPTSSMKSDLTSSQFQPSLLTLPQEGMEIDKKVVIPHMLEAYGEALSQGYKSLEEEILRCISLKVSPISQEPLERLAFYLCKDIANYQGDSYLTQEANKNFDFAFKALYQGTPFGKVPNFVANSSILEAIPHDCEVIHIFDFDLGNGVQWPPMIEAIARMGKKLKLTSIKWSDEGIYECDSTSWNFEKTRKNLYDHARSCGLVLKVDEKGMEELVLELKKMNKREGKKDFLAFNCMVGLAHMGRERSRKNVIDFLNLINSSGCENRGIVTFGDGGAYEKLKNGLNFRSFYNGHLVHYKALLDSFESHFPTRFLEARTCIESIFVGPNVSSHGWLQNWQEMIREVSNLQAEIGLEGNKLSNEILMEVKEILKGYEGNCNSYEAKIEGRNGNNLVLHWKGIQLVRVSTWRK* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1885 540 MobiDBLite consensus disorder prediction 106 136 - -
Aev02g1885 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 539 IPR005202 -
Aev02g1885 540 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 59 539 - -
Aev02g1885 540 Coils Coil 494 514 - -
Aev02g1885 540 Pfam GRAS domain family 169 539 IPR005202 -
Aev02g1885 540 ProSiteProfiles GRAS family profile. 157 539 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1885 Aev-Chr2 20748724 20750346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1885 202 539 GRAS Transcription Factor Family AT5G66770 25.284 4.39e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev02g1885 GRAS 6.5e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1885 - - aip:107628481 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1885 02 20748724 20750346 Aev02g1885 02 20748724 20750346 ECH