Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1879 ATGGATTATTGCACTACTATTCCTAATGGTGGCAGCAAAAACAACACCTCTTCACTCCCAACATCTGAAGTAGCAGGCTCATCATCATCATCATCATCAACTTCAAAGGGAACCAACAACAAGAAGAACAAAAAGGGTAATAATACAAAGAAAATTAGCACCAATAACAACAATAATAATAGCAACAAGGGAGTGATGAAACTTTCAACAGATCCACAAAGTGTAGCAGCAAGAGAAAGAAGGCATAGAATAAGTGATAGGTTCAAGATCTTGCAGAGCATGGTACCAGGTGGTACCAAGATGGACACAGTTTCTATGTTGGAGGAAGCAATTCATTATGTCAAGTTCCTCAAAACACAGATTTGGCTTCATCAAACAATGATGATGATGAACAACAACAACAACTACTTTGTGGATGTTAATGATGAGTCATCACCAAAAATGTTACTTAGTAGTACTGATCAATGCTATAACTTCTCTGTTTCAGAACAGAGCAATAATGTTCCTATGATTCAGCAAAACACTTCTTCAGAGCTACCATTAGGCCAAGGAATCATCACCTTTGATGATCATTCCATTTTTAAAACTTGGCAACCTTAA 600 0.37 MDYCTTIPNGGSKNNTSSLPTSEVAGSSSSSSSTSKGTNNKKNKKGNNTKKISTNNNNNNSNKGVMKLSTDPQSVAARERRHRISDRFKILQSMVPGGTKMDTVSMLEEAIHYVKFLKTQIWLHQTMMMMNNNNNYFVDVNDESSPKMLLSSTDQCYNFSVSEQSNNVPMIQQNTSSELPLGQGIITFDDHSIFKTWQP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1879 199 CDD bHLH_AtIND_like 69 126 - -
Aev02g1879 199 Gene3D - 71 137 IPR036638 GO:0046983
Aev02g1879 199 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 43 177 IPR045843 GO:0003700|GO:0006355
Aev02g1879 199 SMART finulus 74 123 IPR011598 GO:0046983
Aev02g1879 199 MobiDBLite consensus disorder prediction 49 69 - -
Aev02g1879 199 Pfam Helix-loop-helix DNA-binding domain 78 117 IPR011598 GO:0046983
Aev02g1879 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 130 IPR036638 GO:0046983
Aev02g1879 199 MobiDBLite consensus disorder prediction 1 42 - -
Aev02g1879 199 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 43 177 - -
Aev02g1879 199 MobiDBLite consensus disorder prediction 1 76 - -
Aev02g1879 199 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1879 Aev-Chr2 20690019 20690618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1879 66 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 64.286 8.86e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g1879 HLH 3.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1879 - - adu:107475363 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1879 02 20690019 20690618 Aev02g1879 02 20690019 20690618 ECH