Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1846 ATGGGTGTGGACTACTACAAAATTCTTCAGGTAGATCGAAGTGCAAAAGATGATGATCTTAAGAAAGCGTATCGGAAGCTTGCGATGAAGTGGCACCCTGACAAGAACCCTAACAGCAAGAAAGAAGCTGAGGCCAAATTCAAGCAAATCTCAGAAGCCTATGATGTTTTGAGTGATCCACAAAAAAGGGCAGTGTATGATCAGTATGGTGAGGAGGGACTGAAGGGGCAGGTGCCACCGCCGGGAGCTGGAGGATTCTCCACTGCAGGTGATGGTGGGTCCACGACATTCCGATTCAACCCAAGAAGTGCTGATGACATATTTTCAGAGTTTTTTGGGTTCTCAAGCCCCTTTGGTGGAATGGGGGATATGGGTGGCCGTCCAGGTGCATCTGCATTTCCAAGGGGAATGTTTGGGGACGATATCTTCAACTCGTTCCGGACTGGAGCCGGAGAAGGCTCTGCCACTATGCCAAGGAAGAGCGCGCCCATCGAGAGAACATTGCAGTGCAGTTTGGAGGATTTGTACAAAGGGACCACCAAGAAGATGAAGATATCAAGGGATGTTACCGATGCGAGCGGGAGACCCACCACAGTAGAGGAAATTCTGACAATCGAGATCAAGCCGGGTTGGAAGAAAGGAACAAAGATAACTTTTCCAGAGAAGGGCAATGAACAGAGAGGAGTTATCCCTGCTGACCTAGTTTTTATCATCGACGAGAAGCCTCATAGTGTCTTCAAGAGGGACGGCAACGATCTTGTTGCCACGCAGAAGATTTCTCTCGTAGAAGCCCTGACTGGTTACACAGCGCAATTGACAACCCTAGACGGGCGAAACCTTTCGGTCGCCATCAACTCCATCATTAGTCCGACATATGAAGAAATCATTAAAGGAGAGGGTATGCCGATTCCCAAAGAACCTTCCAAAAGGGGGAACTTGAGAATCAAGTTCAACATTAAGTTTCCTTCAAGGCTTACATCCGAGCAGAAAGTCGGCATTAAGCGATTATTGACATCTCCATAA 1023 0.479 MGVDYYKILQVDRSAKDDDLKKAYRKLAMKWHPDKNPNSKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSTAGDGGSTTFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRPGASAFPRGMFGDDIFNSFRTGAGEGSATMPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVTDASGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHSVFKRDGNDLVATQKISLVEALTGYTAQLTTLDGRNLSVAINSIISPTYEEIIKGEGMPIPKEPSKRGNLRIKFNIKFPSRLTSEQKVGIKRLLTSP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1846 340 CDD DnaJ_C 162 325 - -
Aev02g1846 340 Gene3D DnaJ domain 3 122 IPR036869 -
Aev02g1846 340 CDD DnaJ 4 59 IPR001623 -
Aev02g1846 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aev02g1846 340 Gene3D - 243 323 - -
Aev02g1846 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Aev02g1846 340 Gene3D - 163 241 - -
Aev02g1846 340 SUPERFAMILY Chaperone J-domain 3 97 IPR036869 -
Aev02g1846 340 Pfam DnaJ domain 4 67 IPR001623 -
Aev02g1846 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aev02g1846 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aev02g1846 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aev02g1846 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aev02g1846 340 SMART dnaj_3 3 62 IPR001623 -
Aev02g1846 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 243 IPR008971 GO:0006457|GO:0051082
Aev02g1846 340 MobiDBLite consensus disorder prediction 74 95 - -
Aev02g1846 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aev02g1846 340 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 338 - -
Aev02g1846 340 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Aev02g1846 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1846 Aev-Chr2 20284577 20286934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1846 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 3.90e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1846 K09510 - nnu:104602593 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1846 02 20284577 20286934 Aev02g1846 02 20284577 20286934 ECH
Aev06g2929 06 30962128 30965897 Aev02g1846 02 20284577 20286934 PCT