Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1833 ATGGGAAAATCTTTCAAGGATTCCCTCAAAGCACTTGAAGCTGATATACAATTTGCCAACACACTAGCTTCTGAGTATCCAAGAGAATACGATGGCGCCTGCTTACAGATGCGATTATCTTATAGCCCGGCTGCTCAGTTTTTCCTTTTTCTGGTTCAATGGACTGATTGTCACCTTGCTGGAGCTTTAGGATTGCTTAGAATTCTCATATACAAGACTTATGAAGATGGAAAGACAACCATGTCAATTTATGAAAGAAAAGCTAGTCTGAAGGAGTTCTATGGTGTGATCTTTCCTTCTTTATTACAACTCCAGAGAGGAATCACTGATTTAGAGGACAGGAAACAGAAAGATATGTGTGCTGTGAAGTACAAGCCGAGAGACACGACAGGAAAAGGAAAATTATCTGAGATTGATGCAGAAAGAGAGGAAGAATGTGGTATTTGTATGGAGATGAACAATAAGGTTGTGTTGCCGAATTGCTACCATTCAATGTGTATGAAATGCTACCAAGACTGGCGAGCGCGATTGCAGTCTTGCCCTTTCTGCCGGAACAGTCTTAAAAGAGTGAACTCCGGCGACCTCTGGATATACATGAGCAGTAGTGAGATAGATGACTTAGCTTCAATCAACAAGGAGAACTTGAAGAGGCTGTTTATGTACATTGATAAGTTACCCCTAATTGTGCCTGATCCTTTATTCATGTCTTATCCTCAACGTTTTTGA 726 0.4077 MGKSFKDSLKALEADIQFANTLASEYPREYDGACLQMRLSYSPAAQFFLFLVQWTDCHLAGALGLLRILIYKTYEDGKTTMSIYERKASLKEFYGVIFPSLLQLQRGITDLEDRKQKDMCAVKYKPRDTTGKGKLSEIDAEREEECGICMEMNNKVVLPNCYHSMCMKCYQDWRARLQSCPFCRNSLKRVNSGDLWIYMSSSEIDDLASINKENLKRLFMYIDKLPLIVPDPLFMSYPQRF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1833 241 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Aev02g1833 241 PANTHER E3 UBIQUITIN-PROTEIN LIGASE AIRP2 1 240 - -
Aev02g1833 241 SUPERFAMILY RING/U-box 135 189 - -
Aev02g1833 241 PANTHER RING FINGER PROTEIN 41, 151 1 240 - -
Aev02g1833 241 SMART ring_2 146 183 IPR001841 -
Aev02g1833 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 193 IPR013083 -
Aev02g1833 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Aev02g1833 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1833 Aev-Chr2 20145743 20148437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1833 90 188 C3H Transcription Factor Family AT5G01960 28.846 5.17e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1833 K25840 - pop:7466068 409.838