Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1810 ATGGAGGACTTGATAATCTCTCCTTCATCATCATCCTCTCTTGTGTCTCTCCCTCATGAAAATGTTACTACACCAACACTTCAACAAAAGCTTCATTTCCTTCTCCAAAACCAACCGGATTGGTGGATCTATGCCATCTTATGGCAAACAACACATGATGAGAATGGGAACTTGTTCTTGTCTTGGGGAGATGGTCACTACCAAGGCACAAAAGACGCGTCTCCTAAGGTTGTCCCACACATGATGAGCACAACAACTACAACTTCCCATTACCAAAGGAAGTTCACAAAAGGGATGCAATCTCTTATGGAAGACAACATGTGCAACAACAACAATAATGATGTTGAATGGTTCTATGTCATGTCATTGACACGCACATTCTCTCTTGGAGATGCTTCTTATAACTCTTCTCTTCCGGGGAAAGCCTTCACTACCGGTTCTCTCATCTGGCTAAAGAGCGATCAACTTGAGTTTCAGTTTTGTGATTGTGAGAGAGCCAAAGAAGCTTACATGCATGGAATTCAGACACTAACATGCATCCCCGTTGGTGACGGGGTTCTAGAGATGGGTTCATGTGACGTGGTCTCAGAAAATTGGGGCCTGATTCAACAGGTTAAGTCTCTGTTTGGATTAGACCCTAGTGGAATTACCGGGATGTTGCCTAACAAGCAACTAAACCCGATACAATTTTTTGATGATCAGAACATATCTTTTGCTGACATCGGCATTATTGCCGGTGTCCAAGAGGAAGATAATTCCCATGATGATGATCTCAACAAGAAGGAAGCTAGAGGACCGAACAATAATAACAACAACAAGAAGAAAGACACGTTGGCAAAATTCGGGTCACGCCAATCATCCTACGGGGACTCTGAGCATTCTGACTCAGACTGTGGTGCACCGATGGCAGCGGCAGAGAAAAGGATGCCGAAGAAGAGAGGGAGGAAGCCGGGGCTCGGTCGCGAGACGCCACTTAACCACGTGGAAGCAGAGCGACAGAGGAGGGAGAAGCTTAACCACCGATTTTACGCTTTAAGGGCAGTGGTTCCCAACGTGTCAAGGATGGACAAAGCCTCTTTGTTATCCGATGCGGTTGCATACATCAATGAGCTCAAAGCAAAGATCGAGGAGTTGGAGGGGCAAGTATTGAAGGAGTCTTCGAACAAGAAGGTGAAGCTGGAGATTGGTGACAACATGGACAACCAAAGCACCACCACGTCCTCCGTGGACCAAACCGGAGGAGGAGGAGGTTCCAACAACAACAATAATAATAATAACAATGGTAATGATATTAATGCGATTGCGGTTGCGGTTGCGGTTGAGGTTGATGTGAAGATTATAGGGGGTGATGCAATGGTTAGGGTCCAATCGGAGAGTGGAAGCCATCCTGGGGCGAGGCTAATGAGTGCATTGCGGGAATTGGAGTTTCATGTTCACCATGCGAGCATGTCATGTGTTAATAATGACCTTATGCTTCAGGATGTGTTTGTTAGGGTTCCTGAAGGGATGATGAGAACTGAAGAAGGTGTTAAATCTGCTATTCTCATGAGATTGGATCGTTAG 1563 0.4568 MEDLIISPSSSSSLVSLPHENVTTPTLQQKLHFLLQNQPDWWIYAILWQTTHDENGNLFLSWGDGHYQGTKDASPKVVPHMMSTTTTTSHYQRKFTKGMQSLMEDNMCNNNNNDVEWFYVMSLTRTFSLGDASYNSSLPGKAFTTGSLIWLKSDQLEFQFCDCERAKEAYMHGIQTLTCIPVGDGVLEMGSCDVVSENWGLIQQVKSLFGLDPSGITGMLPNKQLNPIQFFDDQNISFADIGIIAGVQEEDNSHDDDLNKKEARGPNNNNNNKKKDTLAKFGSRQSSYGDSEHSDSDCGAPMAAAEKRMPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKAKIEELEGQVLKESSNKKVKLEIGDNMDNQSTTTSSVDQTGGGGGSNNNNNNNNNGNDINAIAVAVAVEVDVKIIGGDAMVRVQSESGSHPGARLMSALRELEFHVHHASMSCVNNDLMLQDVFVRVPEGMMRTEEGVKSAILMRLDR* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1810 520 PANTHER MYC 1 518 IPR045084 GO:0003700|GO:0006355
Aev02g1810 520 Pfam Helix-loop-helix DNA-binding domain 326 371 IPR011598 GO:0046983
Aev02g1810 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 371 IPR011598 GO:0046983
Aev02g1810 520 PANTHER TRANSCRIPTION FACTOR BHLH14 1 518 - -
Aev02g1810 520 Gene3D - 320 387 IPR036638 GO:0046983
Aev02g1810 520 CDD bHLH_AtAIB_like 320 392 - -
Aev02g1810 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 382 IPR036638 GO:0046983
Aev02g1810 520 SMART finulus 328 377 IPR011598 GO:0046983
Aev02g1810 520 Coils Coil 361 388 - -
Aev02g1810 520 MobiDBLite consensus disorder prediction 316 333 - -
Aev02g1810 520 MobiDBLite consensus disorder prediction 393 426 - -
Aev02g1810 520 MobiDBLite consensus disorder prediction 270 293 - -
Aev02g1810 520 MobiDBLite consensus disorder prediction 397 426 - -
Aev02g1810 520 MobiDBLite consensus disorder prediction 251 333 - -
Aev02g1810 520 MobiDBLite consensus disorder prediction 251 269 - -
Aev02g1810 520 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 27 209 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1810 Aev-Chr2 19924988 19926550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1810 22 518 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.737 2.98e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g1810 bHLH-MYC_N 1.3e-46 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1810 - K13422 adu:107491832 613.609