Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1800 ATGAACAGGGGAATGGAAGTTCTATCTCCAGCTTCTTATCTCCACAACTCAAATTGGTTGTTCCAAGAAAGTGAAGGAACAAAATGGACACCAGAAGAGAACAAAAGGTTTGAGAATGCTTTGGCTTTCTATGACAAGGACACACCGGATCGATGGGTGAAGGTCGCAGCAATGATTCCAGGAAAAACTGTTGGTGATGTGATCAAGCAGTATAGAGAGCTAGAAGAAGATGTGAGTGTGATTGAATCTGGGTTTATACCAGTTTCAGGGTACACTACAAGCTCTTTCACATTGGAATGGGTTGATAATCAAGGTTTTGATGGGTTTAAGCAATTCTATGGTGCTGGTTGCAAAAGGGGTACTTCCACTAGGCCTTCTGAACAGGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAAGAACACAGACTATTTCTGATGGGTCTGAAGAAGTATGGCAAAGGAGATTGGAGAAACATTTCAAGGAATTTTGTGACAACAAGGACACCGACTCAGGTTGCGAGTCATGCTCAAAAGTATTTCATCAGACAACTTACCGGAGGGAAGGATAAGAGGAGATCTAGTATCCATGACATCACAATGGTTAATCTCCCCGAGACGAAATCTCTTTCATCAGACAGTAACAGACCTTCTTCTCCGGATCATTTGGTGAAGGCTATGAATCCGAATGAGAATCATAAACTCTTTGGCATGGTAAAACAGGAATTCGACTGGAAATCGCCGTATGAAGGCGCGCCTATGGTTTTCAATTCAACAAATATTGGAAACATGTTCATGACACCATTGTGTGGGATTTCTTCATATGGATCTAAACCGCAGGAGCAGTATTTACTCAGAGGCGCGCTCCATGGACGCCAATTCGGACCAAAGGAGTTATCTGCAGAACTTCTAAGGCACAAGGAATTATCTGTAGCTTTGTGA 939 0.4281 MNRGMEVLSPASYLHNSNWLFQESEGTKWTPEENKRFENALAFYDKDTPDRWVKVAAMIPGKTVGDVIKQYRELEEDVSVIESGFIPVSGYTTSSFTLEWVDNQGFDGFKQFYGAGCKRGTSTRPSEQERKKGVPWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLPETKSLSSDSNRPSSPDHLVKAMNPNENHKLFGMVKQEFDWKSPYEGAPMVFNSTNIGNMFMTPLCGISSYGSKPQEQYLLRGALHGRQFGPKELSAELLRHKELSVAL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1800 312 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Aev02g1800 312 Gene3D - 134 184 - -
Aev02g1800 312 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Aev02g1800 312 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Aev02g1800 312 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 299 - -
Aev02g1800 312 CDD SANT 28 74 IPR001005 -
Aev02g1800 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Aev02g1800 312 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 5 299 IPR043363 -
Aev02g1800 312 CDD SANT 135 180 IPR001005 -
Aev02g1800 312 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Aev02g1800 312 SMART sant 132 182 IPR001005 -
Aev02g1800 312 SMART sant 25 77 IPR001005 -
Aev02g1800 312 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Aev02g1800 312 Gene3D - 21 88 - -
Aev02g1800 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Aev02g1800 312 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Aev02g1800 312 SUPERFAMILY Homeodomain-like 27 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1800 Aev-Chr2 19774643 19776432 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev02g1800 Myb_DNA-binding 2.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1800 - - gmx:778077 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1800 02 19774643 19776432 Aev07g0644 07 4044904 4046562 ECH
Aev02g1800 02 19774643 19776432 Aev02g1800 02 19774643 19776432 ECH
Aev02g1800 02 19774643 19776432 Aev07g2079 07 21919177 21929724 ECH