Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1765 ATGTCAAGTGTTGAAATGTCACATGTGGATTTGGAGCAAGGGAATCATCACAACCAGAACCACCATAACCGTTCTGTGACAGGTAGCACTGACATTAGCCTGTGTTTCTCTGATGCTGATGATGGTGCCTCATGCTACTCCCATTTCTACTCCACAAATGGTGGCTCCTATGATGACTGCAGCTTCTCATGTGTATCTGATCCTGATGCTGCTGAAGATTTGGGTGTTGCTGATTCTGGTAGGGCTTCCTCTGCCACTGATTGCTCTGTTGAGGTTGAAATTGAAACTGGGGTCCCTGAAATTAAGGTGCATTTGGCAAAAGTTGAGAGGGATTGCAGGATTTGCCACCTTGGTTTGGAGAGTGATAGTCATGAATCTGGTCTTCCTATTGAATTGGGGTGTTCTTGTAAGGATGATCTTGCTGCTGCTCACAAGAACTGTGCTGAGGCATGGTTCAAGATCAAGGGTAATAGGACATGTGAAATCTGTCATTCTATTGCCCGGAATGTACATTCAGGAATTGAGGAAACAACAGAGACTTTGAGTGACAACAACAATGTCACCTCAACTGCATCCGCAATCACAACACCTGCCCCTTTAGCCGAACCTCGAAGATTCTGGCACGGCCATCGCTTCCTGAACTTTCTGCTCGCTTGTATGGTGTTTGCGTTCGTCATATCATGGCTCTTTCACTTCAACGTGCCCTCGTCGTAA 714 0.4622 MSSVEMSHVDLEQGNHHNQNHHNRSVTGSTDISLCFSDADDGASCYSHFYSTNGGSYDDCSFSCVSDPDAAEDLGVADSGRASSATDCSVEVEIETGVPEIKVHLAKVERDCRICHLGLESDSHESGLPIELGCSCKDDLAAAHKNCAEAWFKIKGNRTCEICHSIARNVHSGIEETTETLSDNNNVTSTASAITTPAPLAEPRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1765 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 172 IPR013083 -
Aev02g1765 237 CDD RING_CH-C4HC3_MARCH 112 164 - -
Aev02g1765 237 SMART ringv_2 111 164 IPR011016 GO:0008270
Aev02g1765 237 MobiDBLite consensus disorder prediction 1 25 - -
Aev02g1765 237 ProSiteProfiles Zinc finger RING-CH-type profile. 104 170 IPR011016 GO:0008270
Aev02g1765 237 SUPERFAMILY RING/U-box 109 166 - -
Aev02g1765 237 PANTHER ZINC FINGER, RING-CH-TYPE 5 236 - -
Aev02g1765 237 Pfam RING-variant domain 112 163 IPR011016 GO:0008270
Aev02g1765 237 PANTHER OS01G0850200 PROTEIN 5 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1765 Aev-Chr2 19454088 19457412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1765 76 237 C3H Transcription Factor Family AT5G05830 61.111 4.58e-69 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1765 - - gmx:100808666 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1765 02 19454088 19457412 Aev07g2378 07 24508346 24510481 ECH
Aev02g1765 02 19454088 19457412 Aev02g1765 02 19454088 19457412 ECH