Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1720 ATGGAGTTTAGTTCAGAACAACAAGGTAAATCTTACACTTGTGCTTTTTGCCAAAGAGGATTCTCAAATGCACAAGCACTTGGTGGTCACATGAATATTCATAGAAGAGACAGAGCAAAGTTAAGACAATCTTTTGAAGAAAATTTATTGTCTATGGAAAATTCATCACCAATGAAGAGCACTAGTACTACTACTACAATTGATGATCATGAGCTTCTTCATCATCATCATTTGGAAGAGAAAGTTTTGTTTGGATTGGAATATTCTACTAGTAGTAGTAGTAGTGGTACTAGTAGTAGCAATTATAAAAAGTACAAGGATGATCATGCAATAATTATTCAAAGGGGCAAGGGAATTGGTACTTCTTCTTCTTCAGAACTTGTTGGGATCCCAATTAGTCCTAAAAATGAGGTAATAAGGTTTGAGAGTGTTGAAGAGAAGAAAATTGATGATGATTTGGACCTTGAGCTTCGTTTAGGGTTTGAGCCACAACAAGAGGGACCAAATTTGAGCACAAGAGAATTCTTTTGA 531 0.354 MEFSSEQQGKSYTCAFCQRGFSNAQALGGHMNIHRRDRAKLRQSFEENLLSMENSSPMKSTSTTTTIDDHELLHHHHLEEKVLFGLEYSTSSSSSGTSSSNYKKYKDDHAIIIQRGKGIGTSSSSELVGIPISPKNEVIRFESVEEKKIDDDLDLELRLGFEPQQEGPNLSTREFF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1720 176 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 7 166 - -
Aev02g1720 176 Gene3D Classic Zinc Finger 1 72 - -
Aev02g1720 176 SUPERFAMILY beta-beta-alpha zinc fingers 9 38 IPR036236 -
Aev02g1720 176 ProSitePatterns Zinc finger C2H2 type domain signature. 14 34 IPR013087 -
Aev02g1720 176 PANTHER OS07G0101800 PROTEIN 7 166 - -
Aev02g1720 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 12 39 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1720 Aev-Chr2 18943324 18943854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1720 8 103 C2H2 Transcription Factor Family AT3G09290 38.017 2.12e-19 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g1720 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1720 - - ccaj:109793777 111.694