Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev02g1719 | ATGGAACAGGGTCAATATTGTTGGATGCAAGCAACAAATAAGAAGAAATTATTCTCTATGGCCTCTAATCATCATCTCATAACTTTACCACAAAAAACAACAAATAACAATCCTTCCTATGATGATGAGTTATCATGGGAAGAACAAGCTTTTGCTGAAGATGCAGCTGCCGGTTCTCTTGGTGGTTGCATATGGCCACCAAGATCATATTCTTGCAGCTTCTGTAGGAGAGAGTTCCGGTCGGCGCAAGCGCTCGGCGGCCACATGAATGTTCATAGAAGGGATAGAGCAAGGCTTAAGCAACAACCCTCTAGCCCCAAGAATAGTAATAATGAAGCAGCTGAAATTCTAAGTAATAATCCTTTCACATCTTTGGGATCATATAATTTATTATATCCTCCTCCTCCTCCTCCTGTTTGTGGTTTTGCTTGTAATAATAACAAAGCTAACCCTAATTCTGATCTTGATGTTATTGCTTCAACTTCTTCTTCACCCTCACCTAATTCCAATCCTTTGCTATTAGCTCCTCCATCATCATCTTCATCGGTTAATAAAGGACCAATTTGTAATTCTTCTTCTATTGTCCATAACAAGACTTATCCCTTATCACTCTATTCTTGTGAGTCTTCATGGTCAACCTTAGGTGAAGATCATCATCATAGGTTATGTTCTAATAAGTTTTACCCTGAAGCTACTACGGCAAATTGCGAGTTATTCAACTCTCATCCTCGTCCTTTATCTTCTAATATCGTAGCTAAAAAAAAGTTTTATCCTGAATCTGATGATTTAGAGAAAGCCTCGAAAGAGTTGTTGGATTCCAGGTGTAGAGGGAAAGGAAATGATGATAATAATAATGAAGATGGCGGTGATAATGATGATGATGGTGAAATGGCTGTGAGCTTGAATTTGGTTATTTGTAGAACTCACAAACCTTTGCCGTTTGAGACTAAAGAAGAAGATGAAAATCATATCCATTGCAAGAGGAGGAAATTGGATTCTTCTTCCTCAATTCAACTTTTTCTACCAAAGTCATCATCAAGCTCAGTAGTTGATCATCATCAAGTGCAACCAAAGGTGTTTGAATTAAGCCCTAGCTCCATTGAAGAGGAGCTAGATCTGGAGTTGAGGCTTGGTAATAAGTCCAAGGACACAAGGCGAGCATTCTGGGGTACTTCATTCTGA | 1182 | 0.3892 | MEQGQYCWMQATNKKKLFSMASNHHLITLPQKTTNNNPSYDDELSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPSSPKNSNNEAAEILSNNPFTSLGSYNLLYPPPPPPVCGFACNNNKANPNSDLDVIASTSSSPSPNSNPLLLAPPSSSSSVNKGPICNSSSIVHNKTYPLSLYSCESSWSTLGEDHHHRLCSNKFYPEATTANCELFNSHPRPLSSNIVAKKKFYPESDDLEKASKELLDSRCRGKGNDDNNNEDGGDNDDDGEMAVSLNLVICRTHKPLPFETKEEDENHIHCKRRKLDSSSSIQLFLPKSSSSSVVDHHQVQPKVFELSPSSIEEELDLELRLGNKSKDTRRAFWGTSF* | 394 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev02g1719 | 393 | Gene3D | Classic Zinc Finger | 67 | 121 | - | - | |
Aev02g1719 | 393 | SMART | c2h2final6 | 70 | 92 | IPR013087 | - | |
Aev02g1719 | 393 | MobiDBLite | consensus disorder prediction | 86 | 114 | - | - | |
Aev02g1719 | 393 | MobiDBLite | consensus disorder prediction | 273 | 294 | - | - | |
Aev02g1719 | 393 | SUPERFAMILY | beta-beta-alpha zinc fingers | 67 | 96 | IPR036236 | - | |
Aev02g1719 | 393 | MobiDBLite | consensus disorder prediction | 154 | 179 | - | - | |
Aev02g1719 | 393 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 72 | 92 | IPR013087 | - | |
Aev02g1719 | 393 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 70 | 97 | IPR013087 | - | |
Aev02g1719 | 393 | PANTHER | OS07G0101800 PROTEIN | 253 | 382 | - | - | |
Aev02g1719 | 393 | PANTHER | OS07G0101800 PROTEIN | 1 | 235 | - | - | |
Aev02g1719 | 393 | Pfam | C2H2-type zinc finger | 70 | 94 | - | - | |
Aev02g1719 | 393 | PANTHER | C2H2 AND C2HC ZINC FINGER PROTEIN | 1 | 235 | - | - | |
Aev02g1719 | 393 | PANTHER | C2H2 AND C2HC ZINC FINGER PROTEIN | 253 | 382 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev02g1719 | Aev-Chr2 | 18926074 | 18930756 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev02g1719 | 20 | 111 | C2H2 Transcription Factor Family | AT5G06070 | 56.842 | 2.30e-29 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev02g1719 | zf-C2H2_6 | 1.8e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev02g1719 | - | - | gmx:100804148 | 248.825 |