Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1719 ATGGAACAGGGTCAATATTGTTGGATGCAAGCAACAAATAAGAAGAAATTATTCTCTATGGCCTCTAATCATCATCTCATAACTTTACCACAAAAAACAACAAATAACAATCCTTCCTATGATGATGAGTTATCATGGGAAGAACAAGCTTTTGCTGAAGATGCAGCTGCCGGTTCTCTTGGTGGTTGCATATGGCCACCAAGATCATATTCTTGCAGCTTCTGTAGGAGAGAGTTCCGGTCGGCGCAAGCGCTCGGCGGCCACATGAATGTTCATAGAAGGGATAGAGCAAGGCTTAAGCAACAACCCTCTAGCCCCAAGAATAGTAATAATGAAGCAGCTGAAATTCTAAGTAATAATCCTTTCACATCTTTGGGATCATATAATTTATTATATCCTCCTCCTCCTCCTCCTGTTTGTGGTTTTGCTTGTAATAATAACAAAGCTAACCCTAATTCTGATCTTGATGTTATTGCTTCAACTTCTTCTTCACCCTCACCTAATTCCAATCCTTTGCTATTAGCTCCTCCATCATCATCTTCATCGGTTAATAAAGGACCAATTTGTAATTCTTCTTCTATTGTCCATAACAAGACTTATCCCTTATCACTCTATTCTTGTGAGTCTTCATGGTCAACCTTAGGTGAAGATCATCATCATAGGTTATGTTCTAATAAGTTTTACCCTGAAGCTACTACGGCAAATTGCGAGTTATTCAACTCTCATCCTCGTCCTTTATCTTCTAATATCGTAGCTAAAAAAAAGTTTTATCCTGAATCTGATGATTTAGAGAAAGCCTCGAAAGAGTTGTTGGATTCCAGGTGTAGAGGGAAAGGAAATGATGATAATAATAATGAAGATGGCGGTGATAATGATGATGATGGTGAAATGGCTGTGAGCTTGAATTTGGTTATTTGTAGAACTCACAAACCTTTGCCGTTTGAGACTAAAGAAGAAGATGAAAATCATATCCATTGCAAGAGGAGGAAATTGGATTCTTCTTCCTCAATTCAACTTTTTCTACCAAAGTCATCATCAAGCTCAGTAGTTGATCATCATCAAGTGCAACCAAAGGTGTTTGAATTAAGCCCTAGCTCCATTGAAGAGGAGCTAGATCTGGAGTTGAGGCTTGGTAATAAGTCCAAGGACACAAGGCGAGCATTCTGGGGTACTTCATTCTGA 1182 0.3892 MEQGQYCWMQATNKKKLFSMASNHHLITLPQKTTNNNPSYDDELSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPSSPKNSNNEAAEILSNNPFTSLGSYNLLYPPPPPPVCGFACNNNKANPNSDLDVIASTSSSPSPNSNPLLLAPPSSSSSVNKGPICNSSSIVHNKTYPLSLYSCESSWSTLGEDHHHRLCSNKFYPEATTANCELFNSHPRPLSSNIVAKKKFYPESDDLEKASKELLDSRCRGKGNDDNNNEDGGDNDDDGEMAVSLNLVICRTHKPLPFETKEEDENHIHCKRRKLDSSSSIQLFLPKSSSSSVVDHHQVQPKVFELSPSSIEEELDLELRLGNKSKDTRRAFWGTSF* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1719 393 Gene3D Classic Zinc Finger 67 121 - -
Aev02g1719 393 SMART c2h2final6 70 92 IPR013087 -
Aev02g1719 393 MobiDBLite consensus disorder prediction 86 114 - -
Aev02g1719 393 MobiDBLite consensus disorder prediction 273 294 - -
Aev02g1719 393 SUPERFAMILY beta-beta-alpha zinc fingers 67 96 IPR036236 -
Aev02g1719 393 MobiDBLite consensus disorder prediction 154 179 - -
Aev02g1719 393 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Aev02g1719 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Aev02g1719 393 PANTHER OS07G0101800 PROTEIN 253 382 - -
Aev02g1719 393 PANTHER OS07G0101800 PROTEIN 1 235 - -
Aev02g1719 393 Pfam C2H2-type zinc finger 70 94 - -
Aev02g1719 393 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 235 - -
Aev02g1719 393 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 253 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1719 Aev-Chr2 18926074 18930756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1719 20 111 C2H2 Transcription Factor Family AT5G06070 56.842 2.30e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g1719 zf-C2H2_6 1.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1719 - - gmx:100804148 248.825