Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1699 ATGATGCTGAATCGCGGGTCAAATGTTTCGGCTGAAGTGGTTGGTTCCGGTGGTGATGAGCTGTATGAGGAGCAATGGAAGGCATGTGCGGGACCACTGGTGGACGTTCCTCGTGTTGGGGAGAGGGTCTTCTACTTCCCTCAGGGGCACATGGAACAATTAGAAGCTTCTACGAATCAGGAACTGAATCAGAGGATTCCTTTGTTCAAATTACCCACCAAGATCCTTTGTCGAGTGGTGAACGTCCATTTGCTGGCTGAACAAGAAACAGATGAGGTTTATGCACAAATTACTTTGGTGCCGGAATCCAATCAAGCTGAGCTTACAAGTCCTGATCCGTGCCCTGCTGAACCTCCGAGGCCGACAGTTCACTCGTTCTGCAAGGTCTTGACTGCTTCAGATACTAGCACGCACGGCGGATTCTCTGTTCTCAGGAAACATGCGACAGAATGCCTTCCTGCTTTGGACATGTCCCAACCGACACCAACTCAGGAATTGGTTGCCAAGGATCTTCATGGTTATGAATGGCGCTTTAAGCATATATTTAGAGGTCAGCCGCGCAGACACTTGCTTACAACGGGTTGGAGCACCTTCGTGACTTCCAAGAGATTGGTGGCTGGAGACACCTTTGTGTTTTTGAGAGGGGACAACGGAGAATTACGTGTGGGTGTGCGGCGTCTTTCTCGTCAGCAGAGCAGCATGCCATCATCCGTGATTTCCAGTCAGAGCATGCACCTAGGAGTACTTGCAACTGCTTCTCATGCTGTGGCAACTCAGACTCTTTTTGTAGTATATAATAAGCCACGGGCAAGCCAGTTTATCATCAGTGTGAACAAGTATCTGGAGGCTGTTGCCAACAAGTTTAGCGTTGGCATGAGGTTCAAGATGCGCTTCGAGGGGGATGATTCTACTGAAACTGACAGAAGATTTTCGGGTACCATAGTCGGAGTGGAAGATATTTCTCCTCATTGGGCAAATTCTAAATGGCGATCACTTAAGGTTCAATGGGATGAACCAGCAGCTGTTCCAAGACCTGATAGGGTTTCTCCATGGGAGATAGAACCCTTTGTGGCTTCGGCTCCTACAGCCTCAGTTCAACCTACTGTTGTAAAGGCAAAAAGGCCTCGACCACCAAGTGAACATCCAGATCTTGACACGGCATCGGCAGCCTCTGCTTTCTGGGATTCTGGGCGGACACAAACCGATATGACACAACCTAGTGTTATGGCCGAAAGCAAAAGGAGTGACGGTTCCACTATGTGGCACCATAAGCAAATCGATATGAATAGTAAAAGCAACAGCAATACTTTATCAAGGAATCAAACAGAAGGAAGTTGGTTATCTTCTCCCCATTCTTCTTGTCCTTCTCAGTTATTTCAGGACACAACAGATGATAGCAAGAGTGTCTCAGCTTGGCCTGTTTCGAAGCCTCACTCATCCAGATTGAACAATGATCATGTCCCTGACCATGCGGACAAGGAAAACAAGGCTGAGACTGCCACGAGTTGTCGATTGTTTGGTATCGATCTTATTGATCATTCTAGGAACTCACCTGCTGCAGAGAAGGCATCTGCACATGCAGTAAACGTTCCCAGAGTCACAGGCGAAGGCTGTGCCAGCACCGTGTCCCGAACTGAGGCAGGCCACAAGTCTGATGTCTCAAAGGCTTGTAAAGAGAGGAAACAAGACCAGCAGCAAGTATCGCTGAAAGAGACTCAGAGCAGGCAAACATGTAGCAGAAGTCGCACCAAGGTTCAAATGCAGGGGGTTGCTGTAGGTCGTGCAGTCGACTTGAACACATTCGATGGCTACGATCAACTTATTGCTGAATTGGAAGAGTTGTTTGACCTTAAGGGGCAGCTCCAAGTCAGGGATAAGTGGAAAATCGTCTTCACAGATGATGAAGGCGATACAATGCTTGTGGGGGATGATCCGTGGCCTGAATTCTGTAATATGGTGAGAAGGATTTTCATTTGTTCAAGCCAGGATGTGAAGATGAGTACAGGAAGCAAACTCCCCCTCTCATCAGTGGAAGAAGGGACTGTAATAAGCTCAGAAACAGCTGAAACATGA 2073 0.4795 MMLNRGSNVSAEVVGSGGDELYEEQWKACAGPLVDVPRVGERVFYFPQGHMEQLEASTNQELNQRIPLFKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQAELTSPDPCPAEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLSRQQSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYNKPRASQFIISVNKYLEAVANKFSVGMRFKMRFEGDDSTETDRRFSGTIVGVEDISPHWANSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASAPTASVQPTVVKAKRPRPPSEHPDLDTASAASAFWDSGRTQTDMTQPSVMAESKRSDGSTMWHHKQIDMNSKSNSNTLSRNQTEGSWLSSPHSSCPSQLFQDTTDDSKSVSAWPVSKPHSSRLNNDHVPDHADKENKAETATSCRLFGIDLIDHSRNSPAAEKASAHAVNVPRVTGEGCASTVSRTEAGHKSDVSKACKERKQDQQQVSLKETQSRQTCSRSRTKVQMQGVAVGRAVDLNTFDGYDQLIAELEELFDLKGQLQVRDKWKIVFTDDEGDTMLVGDDPWPEFCNMVRRIFICSSQDVKMSTGSKLPLSSVEEGTVISSETAET* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1699 690 PANTHER AUXIN RESPONSE FACTOR 16 679 - -
Aev02g1699 690 MobiDBLite consensus disorder prediction 392 414 - -
Aev02g1699 690 SUPERFAMILY DNA-binding pseudobarrel domain 117 255 IPR015300 -
Aev02g1699 690 Gene3D - 576 667 - -
Aev02g1699 690 MobiDBLite consensus disorder prediction 482 496 - -
Aev02g1699 690 SUPERFAMILY CAD & PB1 domains 581 656 - -
Aev02g1699 690 MobiDBLite consensus disorder prediction 366 496 - -
Aev02g1699 690 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 679 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev02g1699 690 SMART B3_2 126 228 IPR003340 GO:0003677
Aev02g1699 690 Gene3D - 287 361 - -
Aev02g1699 690 Pfam B3 DNA binding domain 126 226 IPR003340 GO:0003677
Aev02g1699 690 Pfam AUX/IAA family 453 663 IPR033389 -
Aev02g1699 690 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Aev02g1699 690 MobiDBLite consensus disorder prediction 422 481 - -
Aev02g1699 690 ProSiteProfiles PB1 domain profile. 580 661 IPR000270 GO:0005515
Aev02g1699 690 Pfam Auxin response factor 252 333 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev02g1699 690 Gene3D - 123 227 IPR015300 -
Aev02g1699 690 CDD B3_DNA 124 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1699 Aev-Chr2 18680046 18684325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1699 17 672 B3 DNA Binding Superfamily AT4G23980 58.939 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev02g1699 AUX_IAA 9.2e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1699 K14486 - gmx:100779003 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2777 06 29284322 29288810 Aev02g1699 02 18680046 18684325 PCT