Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1671 ATGAAGGAGAGGCAACGTTGGAAAGCTGAAGAGGACGCTTTATTATGTGCTTATGTTCGACAGTATGGTCCGAGGGAATGGAATCTCGTGTCGCAGCGCATGAACACGCCTCTTAATAGGGATGCAAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAACCTGGCATTAAGAAAGGATCTCTTACCGAAGAAGAGCAGCGTCTTGTTATCCGACTCCAAGCGAAACACGGCAACAAATGGAAGAAAATTGCTGCAGAAATCCCCGGTCGAACCGCTAAGCGATTAGGCAAGTGGTGGGAAGTGTTCAAGGAGAAGCAGCTCAGGGAAAAACAGGAGATAAACAAGACAATCGGTCCGATTGACGACAGCAAGTACGATCATATACTTGAAACTTTTGCAGAGAAACTAGTGAAAGATCACCCTTCACCATCATATCTTATGGCTGCATCCAATGGACCTTTTCTTCACAATGATGCACCAACCCCTGCTGCATCAACTCTGCTTCCTTCTTGGCTCTCAAATTCTAATAACAACCAATCTGTCCGGCCACTGTCCTCGCCTTCTGTGACCTTAAGTCTCTCTCCCTCCACGGTGGCGGCGCCTCCTCCATGGTTGCAACCTGAAAGGGCACCAGAGAATAATGCTCCTCTTGTTCTGGGGAATGTAACTCCTCATGGATCTGTTCCGGCCTTCAGCGATAAATTGCTCGTGTCTGAGCTAGCAGAGTGCTGTAAAGAGCTGGAAGAAGGGCATCGCGCTTGGGCAGCGCATAAAAAGGAGGCGGCGTGGAGGTTAAGAAGGGTAGAGCTGCAGCTGGAATCGGAGAAGGCGAGTCGAAGGAGGGAGAAGATTGAAGAAACTGAAGCGAAGATCAAAGCTCTTAGGGAAGAACAGAACGCCGCGCTGGACAGAATCGAAGCCGAGTATAGGGATCAGCTTGCTGGACTGAGGAGAGACGCCGAAGCGAAAGAGCAGAAGTTGGCTGAGCAATGGACTTCAAAGCACTTGCGCCTCGCCAAGTTTCTAGAGCAGGTAGGATGCAGACCCCGGCTCGAGCCTAATGGAAGATAA 1074 0.4972 MKERQRWKAEEDALLCAYVRQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEIPGRTAKRLGKWWEVFKEKQLREKQEINKTIGPIDDSKYDHILETFAEKLVKDHPSPSYLMAASNGPFLHNDAPTPAASTLLPSWLSNSNNNQSVRPLSSPSVTLSLSPSTVAAPPPWLQPERAPENNAPLVLGNVTPHGSVPAFSDKLLVSELAECCKELEEGHRAWAAHKKEAAWRLRRVELQLESEKASRRREKIEETEAKIKALREEQNAALDRIEAEYRDQLAGLRRDAEAKEQKLAEQWTSKHLRLAKFLEQVGCRPRLEPNGR* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1671 357 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Aev02g1671 357 PANTHER TRANSCRIPTION FACTOR AS1 1 356 IPR031055 GO:0005634|GO:0006351|GO:0010338
Aev02g1671 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Aev02g1671 357 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Aev02g1671 357 CDD SANT 6 53 IPR001005 -
Aev02g1671 357 Pfam Myb-like DNA-binding domain 7 68 - -
Aev02g1671 357 SMART sant 3 55 IPR001005 -
Aev02g1671 357 SMART sant 58 106 IPR001005 -
Aev02g1671 357 MobiDBLite consensus disorder prediction 179 200 - -
Aev02g1671 357 CDD SANT 63 104 IPR001005 -
Aev02g1671 357 MobiDBLite consensus disorder prediction 179 208 - -
Aev02g1671 357 Gene3D - 4 58 - -
Aev02g1671 357 Gene3D - 62 119 - -
Aev02g1671 357 Coils Coil 266 327 - -
Aev02g1671 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Aev02g1671 357 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 356 - -
Aev02g1671 357 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1671 Aev-Chr2 18413533 18414606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1671 1 349 MYB Transcription Factor Family AT2G37630 68.207 1.46e-166 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev02g1671 Myb_DNA-bind_6 8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1671 K09422 - qsu:111993035 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1671 02 18413533 18414606 Aev02g1671 02 18413533 18414606 ECH