Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1661 ATGGAGCCCCGGAAAATCCTCACAATGGACTGGGATGGCCTCGGCGACGACGATTTCAACGATGATCAGTTCTTCGAGTCCTACGAGCGACTCTCATGCGCCGTCCCCCTCGACCTCGCTTCTTCCTCCGATGATGACGACGACGACGACGATTACGATGATCGACGAACCTCCTTTGCCTCCGCCATCTCCTCTTTTCATACAAAGAAACACAATAAAGGATTCTCGCGAACTGGGGTCAAAACTTCCGTGGACCTGGCCAGCGCCAGGTCCTCTGTGGACCTTGGCGGGGCCAGACCCTCGGTTGATCTGGCCCCAGACTACGGAATATGGATGTCAGCCCCTGCATCCATAACAGAAAGGCGAAAAAGGTTGCTGGATGGAATGGGACTCGACGAGAACAGAGAGTTCTTGAAGGCCTCAAGCGCCCAACTTAGCCATGCAATCTCGAAGAAGTTCGAGAATGGTAACAACCACCCTCGTGTCTCAGTTTCTTCTGATAAGAAATTGGGTGTTCGTGATAATCTTCGTCGTGGTAGTTTTCGAGGTGTTGGAAATGGTGGTGGTATTTCTTCATCTATAACTGCTGCTTCCCCTGTTCCCCCTGTTTTGACAGAGCGAAAAACAGAGCATTCCTCTGTTTCCTATGTTCTGGTTCGATCGCGATCCGAAGGCGACATAGATTCATTCTCAATGGAGAAATTGAGGAAAGATGACTTAATAGGGAAAATCTCGAAGCAACGCCTCACGAGGACCTCAACGCAAATACCCATCCCTCGCGCGAGGATGGTCCCATATGTGAAGATGGTAGCCAAGAATGCCATGGAGGTAGCGAAAATGAAAAAGCACGCTAGAAAAATGTCTACCGCCATGGCAGAATCTGGTTTAGGAGCTTTCTTCCTGATCAAGAATTTGGACACTGGGAAGGAGTTCGTTGTGAACGAGTACGGCGAAAATGGGGCGTGGAATAGGCTCAGTGATTTGCAGACAGGGAAACAATTAACAATGGAAGAATTCGAGAAAAGCTTAGGACATTCACGTGTTGTTAATGATGTAATGAGGCGCGAGAAAGCGACAAGTGAAAATGTAGATTCGAGAAAACTCTCCTCAAGCTCTTACATTTCGAGGAGCTTGAGGATGAGCAAGAGAAGAGGAGCAGCGTTGTTGAAGAACATAAAAGGGGTGGCGAGTGGGTTCATCGGAGAAAGGGAAAGGGAAGCGCCGACGCAGCTCCACCAGCAGATCATGGTGGAGGCGAAACAGACAAAGAACAGATGGGTTAGAGTGAGACAGAGTGGGAAAACTCATAAGGAGCTTTCAGCTTTGCATTTATGTCAAGAGATTCAGGCTCATGATGGTTGTATTTGGAGTATTGAGTTTAGTTTTGATGGTAGATTAATGGCTAGTGGTGGTGAAGATAGGGTTGTTCATGTTTGGGAAGTGCAAGAATGTGAGGTTATGTCTTTGAGACCTGATGAAGGGAATGTTACACCAATTCATCCTTCATTTCATGGTTCATCACAATGTGAGGCTCCTCCTTTGTCAAGTGAGAAGAAGAAGAAGGGAATGTTTGGAAGCAAGAGAGGGAATTCTATTCCTGATTATGTCTATGTTCCTGAAACTGTGTTTTCACTTTCTGATAAACCTTTTTGCTCTTTTCATGGTCATTTGGATCAAGTTTTGGATTTGTCATGGTCTAAATCTCAGCTACTGCTTTCATCTTCAATGGATAAAACAGTGAGATTATGGGACTTGGAAACCAGGACATGTTTAAAGATGTTTGCTCATAATGACTATGTAACCTGCATACAATTCAATCCTATAGATGATGATTATTTCATAAGTGGCTCCCTTGATGCTAAGGTCAGAATATGGAACATTCCAGAACGTCAAGTCGTCGATTGGAAAGATATTCGTGAAATGGTTACTGCCATTTCTTACACACCTGATGGTCAAGGTGCTCTTGTTGGTACACAAAAAGGGACTTGTCGAACCTATAGCACAGAAGATTGCAGATTAGAACAAACAGGCATAGTCGAGCTTCGTCGTAAGAAGAAATCTCATCTAAGAAGGGTCAATGGTTTCCAGTTTGCCCCAGGAAATCCATCAGAAGTACTTGTTACTTCAGCTGATTCCAGGATAAGAATTTTGGATGGGTTAGGAGTTGCTCAAAAGTTTAAAGGTTTTAGAAATGCAAATAGCCAAATGGCAGGTTCATTTAGTCCAAATGGAAGATATATTGTAAGTGCAAGTGAAGACTCACAAGTATACATATGGAAACATGAAGAGCATAAGAATGCAGGAAGTGGAAAAAGTAGAAATATGCTTGTTACAAGGTCTCATGAGTATTTCCAATGTAAAGATGTTTCAATAGCAATACCATGGCCTTTTACCATAAGAGGTGACCCTCCAATTCCGGTGCACAATTCCAAAAGGAACTCAAAGCGCCTTCCGGCGGTGCCGCCTTCAAGTATTGCAGATGACACAACCCGTTTTGCTAATAGCAAAAGATTTCTTCCACCTATTCCCAAGAAAAGTAGTAATAGTAGTAGTAGTAATAATAATCCTGCAGAGGAAGACCTTGCATCAATTTCACATACAGATTCTAGATTAGGAGATTCTTTTCCAAATTGTAAGAGAGTAATTCCACCTCTTCCCAAGAAATCTATCTACCAATCTGATCAAGAAGAAGAAGAGCTTGATTCGATTACTCGCACGAATTCAGCAGCTGATTATTCCTTTAGATCATCAGGTTCTGCCTCAGTTAGATATGGTGATTCTCCTTCTATATCTTCGGCTTATTCGGTACTGGAAGGTAGTTCTAGTTCCTCCACAGTTCATCCTTCGGCGTGGGGATTAGTCATCGTGACGGCCGGGTTTGGAGGCGAAATCAGATGCTATCAGAATTTCGGGTTGCCTCGCAGGATGAGCCGGCAAGGCAATATTTTCTGA 2952 0.4411 MEPRKILTMDWDGLGDDDFNDDQFFESYERLSCAVPLDLASSSDDDDDDDDYDDRRTSFASAISSFHTKKHNKGFSRTGVKTSVDLASARSSVDLGGARPSVDLAPDYGIWMSAPASITERRKRLLDGMGLDENREFLKASSAQLSHAISKKFENGNNHPRVSVSSDKKLGVRDNLRRGSFRGVGNGGGISSSITAASPVPPVLTERKTEHSSVSYVLVRSRSEGDIDSFSMEKLRKDDLIGKISKQRLTRTSTQIPIPRARMVPYVKMVAKNAMEVAKMKKHARKMSTAMAESGLGAFFLIKNLDTGKEFVVNEYGENGAWNRLSDLQTGKQLTMEEFEKSLGHSRVVNDVMRREKATSENVDSRKLSSSSYISRSLRMSKRRGAALLKNIKGVASGFIGEREREAPTQLHQQIMVEAKQTKNRWVRVRQSGKTHKELSALHLCQEIQAHDGCIWSIEFSFDGRLMASGGEDRVVHVWEVQECEVMSLRPDEGNVTPIHPSFHGSSQCEAPPLSSEKKKKGMFGSKRGNSIPDYVYVPETVFSLSDKPFCSFHGHLDQVLDLSWSKSQLLLSSSMDKTVRLWDLETRTCLKMFAHNDYVTCIQFNPIDDDYFISGSLDAKVRIWNIPERQVVDWKDIREMVTAISYTPDGQGALVGTQKGTCRTYSTEDCRLEQTGIVELRRKKKSHLRRVNGFQFAPGNPSEVLVTSADSRIRILDGLGVAQKFKGFRNANSQMAGSFSPNGRYIVSASEDSQVYIWKHEEHKNAGSGKSRNMLVTRSHEYFQCKDVSIAIPWPFTIRGDPPIPVHNSKRNSKRLPAVPPSSIADDTTRFANSKRFLPPIPKKSSNSSSSNNNPAEEDLASISHTDSRLGDSFPNCKRVIPPLPKKSIYQSDQEEEELDSITRTNSAADYSFRSSGSASVRYGDSPSISSAYSVLEGSSSSSTVHPSAWGLVIVTAGFGGEIRCYQNFGLPRRMSRQGNIF* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1661 983 SMART WD40_4 441 480 IPR001680 GO:0005515
Aev02g1661 983 SMART WD40_4 587 626 IPR001680 GO:0005515
Aev02g1661 983 SMART WD40_4 628 667 IPR001680 GO:0005515
Aev02g1661 983 SMART WD40_4 719 760 IPR001680 GO:0005515
Aev02g1661 983 SMART WD40_4 546 584 IPR001680 GO:0005515
Aev02g1661 983 SMART WD40_4 678 718 IPR001680 GO:0005515
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 553 587 - -
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats profile. 739 769 IPR001680 GO:0005515
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats profile. 553 593 IPR001680 GO:0005515
Aev02g1661 983 Pfam WD domain, G-beta repeat 447 479 IPR001680 GO:0005515
Aev02g1661 983 Pfam WD domain, G-beta repeat 589 626 IPR001680 GO:0005515
Aev02g1661 983 Pfam WD domain, G-beta repeat 549 584 IPR001680 GO:0005515
Aev02g1661 983 Pfam WD domain, G-beta repeat 739 760 IPR001680 GO:0005515
Aev02g1661 983 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 7 978 - -
Aev02g1661 983 PRINTS G protein beta WD-40 repeat signature 467 481 IPR020472 -
Aev02g1661 983 PRINTS G protein beta WD-40 repeat signature 613 627 IPR020472 -
Aev02g1661 983 PRINTS G protein beta WD-40 repeat signature 571 585 IPR020472 -
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats profile. 448 489 IPR001680 GO:0005515
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 593 627 - -
Aev02g1661 983 MobiDBLite consensus disorder prediction 806 859 - -
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 448 482 - -
Aev02g1661 983 Gene3D - 534 790 IPR015943 GO:0005515
Aev02g1661 983 MobiDBLite consensus disorder prediction 841 859 - -
Aev02g1661 983 ProSitePatterns Trp-Asp (WD) repeats signature. 467 481 IPR019775 -
Aev02g1661 983 PANTHER WD REPEAT DOMAIN 44 7 978 IPR040324 -
Aev02g1661 983 Gene3D - 424 508 IPR015943 GO:0005515
Aev02g1661 983 ProSiteProfiles Trp-Asp (WD) repeats profile. 593 627 IPR001680 GO:0005515
Aev02g1661 983 SUPERFAMILY WD40 repeat-like 442 966 IPR036322 GO:0005515
Aev02g1661 983 ProSitePatterns Trp-Asp (WD) repeats signature. 571 585 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1661 Aev-Chr2 18274783 18289797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1661 545 757 U-box Gene Family AT2G33340 25.551 8.89e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1661 K20241 - gmx:100779364 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1661 02 18274783 18289797 Aev02g1661 02 18274783 18289797 ECH
Aev06g2688 06 28197259 28202286 Aev02g1661 02 18274783 18289797 PCT