Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1646 ATGGAGCTTTCTGTGAAATGCTTCATCACGCTCTGTCTTTTGCTCATGGCTCTGCTTTCACCTTGCGCCAGTTCAATCAACGAGGGCAATGTGGGAACAGAGAGCTTGCAGAGCTCGAAGAACTCATCAATGGCTGAAAGGTCGAGTGACACTACGAATGAGCATGCTGTTAATAATCCAGAAGAGATAGCTTCCATGGTTGATATGAGTATTCGCAATCACACAGCAAGAAGGAACCTGAACTTCTTCACATGTGGCACCGGGAACCCAATTGATGACTGCTGGCGCTGCGACCGCCGATGGTACGCTCGCCGAAAGCGCCTAGCCGATTGTGGCATCGGTTTCGGCCGGAACGCCATCGGCGGCCGCGATGGCAGCTACTACGTAGTAACCGATGCCGGCGACGACGACCCGGTCAACCCCAGACCAGGCACACTCCGCCATGCCGTCATCCAAGATAGGCCATTATGGATAATCTTCAAGAGGGACATGGTCATCACATTAAAACAAGAGCTCATCATGAACAGCTTCAAGACCATCGATGGCCGTGGTGTTAATGTGCACATTGCTTATGGTGCTTGCCTTACACTTCAATTCATCACCAATGTCATCATCCATGGTTTGCATATTCATGATTGCAAGCCAACTGGGAACGCCATGGTTCGAAGCTCGCCAAGCCATTATGGGTGGAGGACCATGGCTGATGGGGATGGGATCTCAATCTTTGGTTCCAGTCATATTTGGATTGATCATAATTCTCTGTCTAATTGTGCTGATGGGCTCGTTGATGCTATTATGGGTTCAACTGCTATTACCATTTCTAACAACTATTTTACCCACCATAATGAGGTTATGTTACTGGGTCACAGTGACTCCTATGTTAGAGACAAGCAGATGCAAGTAACTATTGCCTACAACCATTTTGGGGAGGGTCTCATCCAAAGAATGCCAAGGTGCAGACATGGATATTTCCACGTGGTAAACAATGACTATACACACTGGGAAATGTATGCAATTGGTGGCAGTGCTGAGCCCACAATCAACAGCCAGGGCAACCGATACCTTGCCCCTCAAAACCCTTTTGCTAAGGAGGTGACAAAGAGGGTGGACACAGGGGAACCGGTATGGAAGGCATGGAATTGGAGGTCAGAGGGAGACCTTCTTCTGAATGGAGCATTTTTCACTTCATCAGGAGCTGGAGCTGCATCAAGCTATGCCAGAGCCTCAAGTTTGGGAGCAAAATCCTCTTCCTTGGTTGGAACCATTACATCTGGTGCTGGTGTTCTTAACTGCCGTAGGGGCTCCATGTGTTAA 1314 0.4871 MELSVKCFITLCLLLMALLSPCASSINEGNVGTESLQSSKNSSMAERSSDTTNEHAVNNPEEIASMVDMSIRNHTARRNLNFFTCGTGNPIDDCWRCDRRWYARRKRLADCGIGFGRNAIGGRDGSYYVVTDAGDDDPVNPRPGTLRHAVIQDRPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACLTLQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLVDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPQNPFAKEVTKRVDTGEPVWKAWNWRSEGDLLLNGAFFTSSGAGAASSYARASSLGAKSSSLVGTITSGAGVLNCRRGSMC* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1646 437 MobiDBLite consensus disorder prediction 33 57 - -
Aev02g1646 437 Gene3D - 88 430 IPR012334 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 379 403 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 408 431 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 337 356 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 235 256 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 135 160 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 111 128 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 171 187 IPR018082 -
Aev02g1646 437 PRINTS Pollen allergen Amb family signature 315 334 IPR018082 -
Aev02g1646 437 PANTHER PECTATE LYASE 38 434 - -
Aev02g1646 437 SUPERFAMILY Pectin lyase-like 66 432 IPR011050 -
Aev02g1646 437 Pfam Pectate lyase 173 352 IPR002022 -
Aev02g1646 437 PANTHER PECTATE LYASE 18-RELATED 38 434 IPR045032 GO:0030570
Aev02g1646 437 SMART amb_all 163 360 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1646 Aev-Chr2 18115700 18122312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1646 30 437 Polysaccharide Lyase AT4G13710 77.163 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1646 K01728 - gmx:100809277 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1646 02 18115700 18122312 Aev02g1646 02 18115700 18122312 ECH