Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1645 ATGGTGGTGATAGAACAACAGCAAGAGACCGAGGAGAAGGAAAAGCACGCCACGATTCCTCAAAACGCCGCCACAGCTAAGTCGTCCACCGTCGACGCCGAACCCGACCCCGGAAAGGACATTTCCGATGGCTTTGAGACCGCCAGCGACACCGAGCTCGGCGGCGACGACGACGACGACGGCGCCGGCGGAGGGGAGGCGTGCGAAGAACATCCACGTCAGCAAGAGCAAGAGCGAGACCAAGAGACGGATCGCGATTCTTCCAACGATGCGTCCAACAGTGAGGAATTGGAACAGAAAGCCCTAACTCAAGCAAATGATGCGAAGTTGGAAGGGAATAAACTTTTCGGAGATGGGAAGTATGAGGAGGCGCTTTCGCAGTATGAAATTGCTTTGCAGGTAGCACTGGACGTGCCCTCATCTGTGGAAATACGTTCGATATGCCATGCAAACCGTGGCGTATGCTTCCTGAAACTGGGACAATATGAAAACACAGTCAAAGAATGCACCAAAGCATTAGAATTGAATCCTTTGTATGTTAAAGCTTTGGTAAGAAGAGGAGAGGCTCAGGAAAAGCTTGAACATTTTGAAGAGGCCATTGCAGATATGAAGAAAATCTTAGAAATTGAGCCGTCAAATGATCAAGCTCGGAAATCCATTCGCCGACTGGAGCCCCTTGCTGCTGAAAAGCGGGAAAAAATGAAGGAAGAAATGATTGGAAAACTGAAAGAAATGGGGAATTCAGTATTGGGTCGCTTCGGGATGAGCGTCGACAACTTCAAAGCTGTCAAAGATCCAAACACTGGCTCCTATTCTATCTCTTTCCAACGCTAA 834 0.4916 MVVIEQQQETEEKEKHATIPQNAATAKSSTVDAEPDPGKDISDGFETASDTELGGDDDDDGAGGGEACEEHPRQQEQERDQETDRDSSNDASNSEELEQKALTQANDAKLEGNKLFGDGKYEEALSQYEIALQVALDVPSSVEIRSICHANRGVCFLKLGQYENTVKECTKALELNPLYVKALVRRGEAQEKLEHFEEAIADMKKILEIEPSNDQARKSIRRLEPLAAEKREKMKEEMIGKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1645 277 SUPERFAMILY TPR-like 104 224 IPR011990 GO:0005515
Aev02g1645 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 33 277 - -
Aev02g1645 277 Coils Coil 186 206 - -
Aev02g1645 277 ProSiteProfiles TPR repeat profile. 146 179 IPR019734 GO:0005515
Aev02g1645 277 MobiDBLite consensus disorder prediction 1 97 - -
Aev02g1645 277 SMART tpr_5 146 179 IPR019734 GO:0005515
Aev02g1645 277 SMART tpr_5 180 213 IPR019734 GO:0005515
Aev02g1645 277 SMART tpr_5 105 138 IPR019734 GO:0005515
Aev02g1645 277 Gene3D Tetratricopeptide repeat domain 93 239 IPR011990 GO:0005515
Aev02g1645 277 Pfam Tetratricopeptide repeat 148 177 IPR001440 GO:0005515
Aev02g1645 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 33 277 - -
Aev02g1645 277 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Aev02g1645 277 Pfam Tetratricopeptide repeat 181 213 IPR013105 -
Aev02g1645 277 MobiDBLite consensus disorder prediction 65 93 - -
Aev02g1645 277 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1645 Aev-Chr2 18084695 18089170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1645 88 236 Calmodulin-binding Proteins AT3G25230 36.943 1.85e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1645 K24926 - tcc:18589061 340.502