Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1621 ATGACCGTGACCGGAGAAGAAGATAACACCGACAGCACATGTTGTCCCACCGATGATACTCTCAACCTCGACATCACGATGGAAGAGACCTCTTTTTGCTGTGAACAATTGCCAGATGGTGAGTGCATTGAGGTTCAGAAAGAAGAAGATGCTACATTAATTGAATTAGATTGTCAAAATGGCTTTTCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCATATGACGATGCTTACAATTACTATATTTGTTATGCCAAGGAGGTGGGGTTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAACAGCAGAGAAAAATACGGTGCAGTACTTTGCTGTAGTAGCCAGGGTTTCAAAAGAATAAAAGATGTAAACAATTTGAGAAAAGAAACAAGAACTGGTTGTCCTGCAATGATAAGGATGAGGTTGGTGGACTCTCAGAGATGGAGGATACTTGAGGTTACACTCGAACATAACCACATGTTAGGTGCTAAGATATGCAATTCAGTTAAGAAGGTGGGAAGTGGAACCAAAAGGAAGTCATTGCCTAGTTCTGATGCTGAAGTGCAAACAATTAAGTTATACCGTGCACTTGTTATAGATGCCGGAGGTAATTGCAATTCAAACTCCAACGCAGGAGAAGACAGAACTTTACCTGAATTTTCTAATAGGTTGAGCCTTAGAAAGGGTGACACACAAGCCATTTATAATTTCCTCTGCCGCATGCAGTTGACTAATCCTAACTTCTTTTACTCGATGGATTTCAATGATGAAGGGCATTTGAGGAATGCATTTTGGGTAGATGCTAGGTCAAGGGCTGCTTGTGGTTATTTCGGTGATGTTATTTACTTTGACAACACTTACTTGTCAAACAAATTTGAAATCCCTCTTGTGGCTTTTGTTGGGTTAAATCACCATGGCCAATCGGTGTTACTAGGTTGTGGCCTGCTCGCAGGTGAAACAACAGAGTCTTATGTATGGTTGTTCCAAGCATGGGTTACGTGTATGTCAGGATGTTTTCCCCAAACTATTATTACTGATAGGTGCAAGGCCTTGCAGAGTGCCATTGCAGAAGTTTTTCCCAGATCTCATCATCGATTTGGGTTGCCATTAATCATGAAAAAAGTACCTGAAAAATTGGGAGGGTTGCGCAACTATGATGCAATCAGGAAAGCACTAATTAAAGCAGTTTATGAGACATTGAAAGTGATTGAATTTGAAGCGGCATGGGGATTTATGATTCAGCATTTTGGAGTTGGTGATCATGAGTGGCTTCGTTCTCTATACGAAGATCGGATTTGTTGGGCACCGGTATATTTGAAGGACATATTTTTCGCTGGAATGTCTGCAGCACGCCCTGGTGAGAGCTTTAGTCCATTTTTTGATAGATATGTGCACAAACAGACCCCTTTGAAGGAATTTCTCGACAAGTATGAACTAGCTCTCCACAAGAAGCACATGGAAGAATCTCTTGCAGATATTGAATCAAGAAGCTCAAGCCCCTCATTGAAAACCAGATGTTCTTTTGAATTGCAGCTCTCTAGAATGTACACTAGACAAATGTTCATGAAGTTCCAATTTGAAGTGGAAGAAATGTACTCTTGTTACGGTACAACACAGTTGCACGTCGACGGCCCGGTCATAATTTTCTTGGTCAAAGAGCGTGTTTTGTGCGAGGGTAACCGACGCGAGATTAGGGATTACGAAGTTCTGTACAGTAGGACAGCGGGCGAAGTTCGTTGCATTTGCAGTTGCTTTAATTTCTATGGATATTTGTGTCGGCACGCGTTGTGCGTGCTCAATTTTAACGGGGTGGAAGAGATACCTTCCAAATACATTCTTTCGAGGTGGAAGAAAGATTACAAGCGCCTTCATGTTCCCGATCATGGCTCTGGTAACACCGATGATATTGACAAGACTCAGTGGTCTAACCAGTTATTCAGAAGTGCCTTGCAAGTTGTGGAGGAGGGTATAATCTCTCTAGACCATTACAATGTAGCATTGCAGGCTATTGAAGAATCACTGAGCAAGAAGAGAAGCATGAGTGAGAAGAATACGGTGTGTTCTTCTTCTTCTTCTCCGAACGATAAGGGCTTATCTCTCACTCCTAATCTCCACATCATGGGCATCTTTGCTGACATGCCTCGTGTATCCATGTCAACATATCTTGCGAGATGGAGGAAGGATATTAAGAGATTGTTTGTACCTCAACTTGGCTCCAACAATGTCGATGTAACTAACCCGGTTCAGTGTTTTGATCATCTGTACAAATGCGCGATGCGAGTCGTCGAAGAAGGGATGATATCCCAAGATCATTACATGGTTTCTTTGAAGGCATTTAAAGAGTCATTGAATAAGATTTGCCTTGTAGCAGGCAAGATTTATTGA 2409 0.4193 MTVTGEEDNTDSTCCPTDDTLNLDITMEETSFCCEQLPDGECIEVQKEEDATLIELDCQNGFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNNLRKETRTGCPAMIRMRLVDSQRWRILEVTLEHNHMLGAKICNSVKKVGSGTKRKSLPSSDAEVQTIKLYRALVIDAGGNCNSNSNAGEDRTLPEFSNRLSLRKGDTQAIYNFLCRMQLTNPNFFYSMDFNDEGHLRNAFWVDARSRAACGYFGDVIYFDNTYLSNKFEIPLVAFVGLNHHGQSVLLGCGLLAGETTESYVWLFQAWVTCMSGCFPQTIITDRCKALQSAIAEVFPRSHHRFGLPLIMKKVPEKLGGLRNYDAIRKALIKAVYETLKVIEFEAAWGFMIQHFGVGDHEWLRSLYEDRICWAPVYLKDIFFAGMSAARPGESFSPFFDRYVHKQTPLKEFLDKYELALHKKHMEESLADIESRSSSPSLKTRCSFELQLSRMYTRQMFMKFQFEVEEMYSCYGTTQLHVDGPVIIFLVKERVLCEGNRREIRDYEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPSKYILSRWKKDYKRLHVPDHGSGNTDDIDKTQWSNQLFRSALQVVEEGIISLDHYNVALQAIEESLSKKRSMSEKNTVCSSSSSPNDKGLSLTPNLHIMGIFADMPRVSMSTYLARWRKDIKRLFVPQLGSNNVDVTNPVQCFDHLYKCAMRVVEEGMISQDHYMVSLKAFKESLNKICLVAGKIY* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1621 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 725 794 - -
Aev02g1621 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 45 688 - -
Aev02g1621 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 725 794 IPR031052 GO:0006355
Aev02g1621 802 Pfam FAR1 DNA-binding domain 86 169 IPR004330 -
Aev02g1621 802 Pfam MULE transposase domain 288 381 IPR018289 -
Aev02g1621 802 SMART 26again6 586 613 IPR006564 GO:0008270
Aev02g1621 802 Pfam SWIM zinc finger 583 607 IPR007527 GO:0008270
Aev02g1621 802 ProSiteProfiles Zinc finger SWIM-type profile. 575 611 IPR007527 GO:0008270
Aev02g1621 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 45 688 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1621 Aev-Chr2 17840153 17844467 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev02g1621 MULE 1.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1621 K17604 - gmx:100796448 1219.53