Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev02g1609 | ATGAAGGCCGAGGGAGGCGAGGGCAACTCGAGTGAGATGGCTGAAGTGATGAGACTGGAGTGGTGGACAGACGATGGCTGTGTGGGTGAAATATTGAATGGAGGATTGGAGCTTGGAGGCGGAGCCGTGTGTTTTGTTTGTCTGCAGCTAAACAGAAAACATAAAGAGGAAGCCGCCGCCGCCGATGTTTCTGTTCCGATTTCGCTGCCGCTCCGCCGTCTACGGTCGTGCGATGTGGAAGATAACGCAGAGAGAAACCCTTTCTCCTCTGTGTCGCCGATAACACGAAAAATGGATACCAACGCATTCAAAGATGACAACTTTGTCGAAAACGAAGAATCAGAAATCTCCGAGTCCTTTGTTTGCTGTGTTTGCCTGGATCTATTATACAAGCCCATTGTATTGTCGTGTGGTCATGTATCTTGTTTCTGGTGTGTCCACAATTCAATGGATGGTGTACGTGAATCTCGTTGTCCAATTTGCAGGCGTCCATACTATCACTTTCCGACAATCTGTCAAATGCTTCACTTTTTGCTTCTAAAGATGTATCCTGTTGCTTACAAGAGAAGGGAAAAGCAGATGCTTGAGGAAGAAAAGAAAATGGAATGCTTCTCCCCTCAAATCGATGCTTTTACATTTGGATCACAAGCTAAATTTGACCATCCTGGGAGTTCACCTTCCAGCACTGCTACCGATCCGGTATCCAACAAATGCAATTTGGAATCTTCTGAATGTACAGAGCAATCAGGGTCTGCAACTCATGAAGGAAAACAAGGGGCCATCGTATCGTTACACACATCCAACAAAACACCTGAAGATATTGAAACTCCTTCTGTTGAAGGAAAAAAGTCACCGCAGAATAATGAACAAAATCAGCAACAGAAAGTATTACTTGCAGATGTGATGTGTACCAAGTGCAAGCAAATGCTTTTTCATCCTGTTGTTCTTAATTGTGGTCATGTATACTGTGAAGTTTGCATCATCAACATAGCCGATGAGATGCTTAGATGTCAAGTTTGTCATAGTCCACATCCAAGAGGCTTTCCGAAAGTTTGTTTGGCCCTTGATCACTTTTTGGAGGGACAATTTCCAGAAGAATATGTGCAGCGAAGAGAAGCTGTTCAACTCAGCCAAGTCAAAATCAAACCTGAGACATCTTCTAATTCAGGTTCAATGGATGGTAGTAAAGGAGGAAATATAATTTGGTGCTCTGATTCTGGGTGGAAAGTTCATATTGGAGCTGGTTGTGATTTTTGCGGGATGTTCCCGATAATTGGGGATAGATACAGATGCGTTGACTGCAAGGAGAAGATTGGTTTTGATCTCTGTGGCGATTGCTATAACACGCGCTCAAAGCTTCCAGGCCGATTTAATCAGCAGCACACCCCTGAGCACAAGTTTGAGCATATACCTACTTTAAGGGCGGGACTAGTTGACAATTTAGAACTTATATCCCAAGATCCTGGTTTATCTGATGACGAAGAAGATAACCAGAATGAATCCGAAGCTGCCAACTGA | 1518 | 0.4387 | MKAEGGEGNSSEMAEVMRLEWWTDDGCVGEILNGGLELGGGAVCFVCLQLNRKHKEEAAAADVSVPISLPLRRLRSCDVEDNAERNPFSSVSPITRKMDTNAFKDDNFVENEESEISESFVCCVCLDLLYKPIVLSCGHVSCFWCVHNSMDGVRESRCPICRRPYYHFPTICQMLHFLLLKMYPVAYKRREKQMLEEEKKMECFSPQIDAFTFGSQAKFDHPGSSPSSTATDPVSNKCNLESSECTEQSGSATHEGKQGAIVSLHTSNKTPEDIETPSVEGKKSPQNNEQNQQQKVLLADVMCTKCKQMLFHPVVLNCGHVYCEVCIINIADEMLRCQVCHSPHPRGFPKVCLALDHFLEGQFPEEYVQRREAVQLSQVKIKPETSSNSGSMDGSKGGNIIWCSDSGWKVHIGAGCDFCGMFPIIGDRYRCVDCKEKIGFDLCGDCYNTRSKLPGRFNQQHTPEHKFEHIPTLRAGLVDNLELISQDPGLSDDEEDNQNESEAAN* | 506 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev02g1609 | 505 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 253 | 370 | IPR013083 | - | |
Aev02g1609 | 505 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 190 | IPR013083 | - | |
Aev02g1609 | 505 | MobiDBLite | consensus disorder prediction | 488 | 505 | - | - | |
Aev02g1609 | 505 | ProSiteProfiles | Zinc finger RING-type profile. | 303 | 341 | IPR001841 | - | |
Aev02g1609 | 505 | MobiDBLite | consensus disorder prediction | 486 | 505 | - | - | |
Aev02g1609 | 505 | SUPERFAMILY | RING/U-box | 402 | 471 | - | - | |
Aev02g1609 | 505 | Pfam | RING-type zinc-finger | 303 | 327 | IPR027370 | - | |
Aev02g1609 | 505 | ProSiteProfiles | Zinc finger RING-type profile. | 122 | 162 | IPR001841 | - | |
Aev02g1609 | 505 | Gene3D | - | 405 | 471 | IPR043145 | - | |
Aev02g1609 | 505 | MobiDBLite | consensus disorder prediction | 266 | 291 | - | - | |
Aev02g1609 | 505 | Pfam | Zinc finger, ZZ type | 413 | 451 | IPR000433 | GO:0008270 | |
Aev02g1609 | 505 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRT1-LIKE | 104 | 501 | - | - | |
Aev02g1609 | 505 | PANTHER | UNCHARACTERIZED | 104 | 501 | - | - | |
Aev02g1609 | 505 | CDD | RING-HC | 122 | 161 | - | - | |
Aev02g1609 | 505 | SMART | ring_2 | 122 | 161 | IPR001841 | - | |
Aev02g1609 | 505 | SMART | ring_2 | 303 | 340 | IPR001841 | - | |
Aev02g1609 | 505 | Pfam | Zinc finger, C3HC4 type (RING finger) | 121 | 165 | - | - | |
Aev02g1609 | 505 | SUPERFAMILY | RING/U-box | 111 | 172 | - | - | |
Aev02g1609 | 505 | ProSitePatterns | Zinc finger RING-type signature. | 318 | 327 | IPR017907 | - | |
Aev02g1609 | 505 | ProSiteProfiles | Zinc finger ZZ-type profile. | 411 | 475 | IPR000433 | GO:0008270 | |
Aev02g1609 | 505 | SUPERFAMILY | RING/U-box | 297 | 344 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev02g1609 | 107 | 162 | C3H Transcription Factor Family | AT1G74990 | 36.842 | 2.79e-07 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev02g1609 | - | - | aprc:113868764 | 526.554 |