Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1609 ATGAAGGCCGAGGGAGGCGAGGGCAACTCGAGTGAGATGGCTGAAGTGATGAGACTGGAGTGGTGGACAGACGATGGCTGTGTGGGTGAAATATTGAATGGAGGATTGGAGCTTGGAGGCGGAGCCGTGTGTTTTGTTTGTCTGCAGCTAAACAGAAAACATAAAGAGGAAGCCGCCGCCGCCGATGTTTCTGTTCCGATTTCGCTGCCGCTCCGCCGTCTACGGTCGTGCGATGTGGAAGATAACGCAGAGAGAAACCCTTTCTCCTCTGTGTCGCCGATAACACGAAAAATGGATACCAACGCATTCAAAGATGACAACTTTGTCGAAAACGAAGAATCAGAAATCTCCGAGTCCTTTGTTTGCTGTGTTTGCCTGGATCTATTATACAAGCCCATTGTATTGTCGTGTGGTCATGTATCTTGTTTCTGGTGTGTCCACAATTCAATGGATGGTGTACGTGAATCTCGTTGTCCAATTTGCAGGCGTCCATACTATCACTTTCCGACAATCTGTCAAATGCTTCACTTTTTGCTTCTAAAGATGTATCCTGTTGCTTACAAGAGAAGGGAAAAGCAGATGCTTGAGGAAGAAAAGAAAATGGAATGCTTCTCCCCTCAAATCGATGCTTTTACATTTGGATCACAAGCTAAATTTGACCATCCTGGGAGTTCACCTTCCAGCACTGCTACCGATCCGGTATCCAACAAATGCAATTTGGAATCTTCTGAATGTACAGAGCAATCAGGGTCTGCAACTCATGAAGGAAAACAAGGGGCCATCGTATCGTTACACACATCCAACAAAACACCTGAAGATATTGAAACTCCTTCTGTTGAAGGAAAAAAGTCACCGCAGAATAATGAACAAAATCAGCAACAGAAAGTATTACTTGCAGATGTGATGTGTACCAAGTGCAAGCAAATGCTTTTTCATCCTGTTGTTCTTAATTGTGGTCATGTATACTGTGAAGTTTGCATCATCAACATAGCCGATGAGATGCTTAGATGTCAAGTTTGTCATAGTCCACATCCAAGAGGCTTTCCGAAAGTTTGTTTGGCCCTTGATCACTTTTTGGAGGGACAATTTCCAGAAGAATATGTGCAGCGAAGAGAAGCTGTTCAACTCAGCCAAGTCAAAATCAAACCTGAGACATCTTCTAATTCAGGTTCAATGGATGGTAGTAAAGGAGGAAATATAATTTGGTGCTCTGATTCTGGGTGGAAAGTTCATATTGGAGCTGGTTGTGATTTTTGCGGGATGTTCCCGATAATTGGGGATAGATACAGATGCGTTGACTGCAAGGAGAAGATTGGTTTTGATCTCTGTGGCGATTGCTATAACACGCGCTCAAAGCTTCCAGGCCGATTTAATCAGCAGCACACCCCTGAGCACAAGTTTGAGCATATACCTACTTTAAGGGCGGGACTAGTTGACAATTTAGAACTTATATCCCAAGATCCTGGTTTATCTGATGACGAAGAAGATAACCAGAATGAATCCGAAGCTGCCAACTGA 1518 0.4387 MKAEGGEGNSSEMAEVMRLEWWTDDGCVGEILNGGLELGGGAVCFVCLQLNRKHKEEAAAADVSVPISLPLRRLRSCDVEDNAERNPFSSVSPITRKMDTNAFKDDNFVENEESEISESFVCCVCLDLLYKPIVLSCGHVSCFWCVHNSMDGVRESRCPICRRPYYHFPTICQMLHFLLLKMYPVAYKRREKQMLEEEKKMECFSPQIDAFTFGSQAKFDHPGSSPSSTATDPVSNKCNLESSECTEQSGSATHEGKQGAIVSLHTSNKTPEDIETPSVEGKKSPQNNEQNQQQKVLLADVMCTKCKQMLFHPVVLNCGHVYCEVCIINIADEMLRCQVCHSPHPRGFPKVCLALDHFLEGQFPEEYVQRREAVQLSQVKIKPETSSNSGSMDGSKGGNIIWCSDSGWKVHIGAGCDFCGMFPIIGDRYRCVDCKEKIGFDLCGDCYNTRSKLPGRFNQQHTPEHKFEHIPTLRAGLVDNLELISQDPGLSDDEEDNQNESEAAN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1609 505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 370 IPR013083 -
Aev02g1609 505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 190 IPR013083 -
Aev02g1609 505 MobiDBLite consensus disorder prediction 488 505 - -
Aev02g1609 505 ProSiteProfiles Zinc finger RING-type profile. 303 341 IPR001841 -
Aev02g1609 505 MobiDBLite consensus disorder prediction 486 505 - -
Aev02g1609 505 SUPERFAMILY RING/U-box 402 471 - -
Aev02g1609 505 Pfam RING-type zinc-finger 303 327 IPR027370 -
Aev02g1609 505 ProSiteProfiles Zinc finger RING-type profile. 122 162 IPR001841 -
Aev02g1609 505 Gene3D - 405 471 IPR043145 -
Aev02g1609 505 MobiDBLite consensus disorder prediction 266 291 - -
Aev02g1609 505 Pfam Zinc finger, ZZ type 413 451 IPR000433 GO:0008270
Aev02g1609 505 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRT1-LIKE 104 501 - -
Aev02g1609 505 PANTHER UNCHARACTERIZED 104 501 - -
Aev02g1609 505 CDD RING-HC 122 161 - -
Aev02g1609 505 SMART ring_2 122 161 IPR001841 -
Aev02g1609 505 SMART ring_2 303 340 IPR001841 -
Aev02g1609 505 Pfam Zinc finger, C3HC4 type (RING finger) 121 165 - -
Aev02g1609 505 SUPERFAMILY RING/U-box 111 172 - -
Aev02g1609 505 ProSitePatterns Zinc finger RING-type signature. 318 327 IPR017907 -
Aev02g1609 505 ProSiteProfiles Zinc finger ZZ-type profile. 411 475 IPR000433 GO:0008270
Aev02g1609 505 SUPERFAMILY RING/U-box 297 344 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1609 107 162 C3H Transcription Factor Family AT1G74990 36.842 2.79e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1609 - - aprc:113868764 526.554