Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1587 ATGGACGGTCGCCGGAGGATAACGCTTTACGATCAAATGACAGCTGGCAACAGCACCTCGCTAGCTGACCTGATCCTTAGCGACAATGTCGTTTTAACCGATCAGAAGAGCGATGATGCCCCTGCCGCTGCCGCCGCCGTCGCCGCCGGCGGAGGAAGCTGCCAGCTCAGCCAGCAGAGTCGAACACTCATAGACATCCTCCACGACGATGAACAACACAACAACAACAATAACAACGAGACGACGTCGGATCGAAAATCTAAGAAAGCGTTAAACTTCATGGACAAGCTCAGGCTCAAGCTCACACTCAATTCAAAATCAAATCACAACACTAACAACAACAACAACGACAACGATGATGATGATGATAACAATTACGAGTTGACTCAGCAAGGAAACAATACTCACCAGCAACAGGAACAACAACAACAAAACGACGTCGTTTCCGCAGAGCCTGAAACGGCGGCGGAAGTTTCGGTTGCGGAAACAGTGGTGGGAGTTTCACTGATGGATTTGTTGGAAGAAACGGACGTGGAAACGGTGGCGAGTAATAGAATGAGCGATGCTGATTTTGAAGTTTTGAATAATGAATTTGATGAAGGAGAAGAAGAAGGGGCGACTATGGTGGAACGCAATTGCTGCGTGTGCATGGTGAGGCATAAAGGTGCAGCGTTTATACCATGCGGCCACACGTTCTGCAGGGCTTGCTCCAGAGAGGTTTGGGTTAGCAGAGGGAACTGCCCCCTCTGCAACAATTTCATTTTGGAAATTCTTGATATTTTCTGA 786 0.4847 MDGRRRITLYDQMTAGNSTSLADLILSDNVVLTDQKSDDAPAAAAAVAAGGGSCQLSQQSRTLIDILHDDEQHNNNNNNETTSDRKSKKALNFMDKLRLKLTLNSKSNHNTNNNNNDNDDDDDNNYELTQQGNNTHQQQEQQQQNDVVSAEPETAAEVSVAETVVGVSLMDLLEETDVETVASNRMSDADFEVLNNEFDEGEEEGATMVERNCCVCMVRHKGAAFIPCGHTFCRACSREVWVSRGNCPLCNNFILEILDIF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1587 261 PANTHER OS01G0917900 PROTEIN 3 113 - -
Aev02g1587 261 Pfam Zinc finger, C3HC4 type (RING finger) 210 254 - -
Aev02g1587 261 PANTHER OS01G0917900 PROTEIN 121 261 - -
Aev02g1587 261 MobiDBLite consensus disorder prediction 127 150 - -
Aev02g1587 261 MobiDBLite consensus disorder prediction 104 155 - -
Aev02g1587 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 261 IPR013083 -
Aev02g1587 261 CDD RING-HC 213 250 - -
Aev02g1587 261 PANTHER OS01G0917900 PROTEIN 121 261 - -
Aev02g1587 261 ProSiteProfiles Zinc finger RING-type profile. 213 251 IPR001841 -
Aev02g1587 261 MobiDBLite consensus disorder prediction 69 90 - -
Aev02g1587 261 SUPERFAMILY RING/U-box 198 257 - -
Aev02g1587 261 SMART ring_2 213 250 IPR001841 -
Aev02g1587 261 PANTHER OS01G0917900 PROTEIN 3 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1587 Aev-Chr2 17494500 17495285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1587 1 261 C3H Transcription Factor Family AT3G25030 34.982 5.34e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1587 - - cam:101511225 189.119