LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g1584	ATGTTTGGTTCAAAGATGTCTATTCTAGCTACAGATATGAGTGTTATTCTTCTCTACTGTCTTCTTCAGTCCCTATGTTTCTTCCTTTTAACCATACCTTTCATTAAAGCATCAGAATTAAATGTCCAAAACTATGAATCTGATAGAATAACTGATCTTCCTGGCCAGCCTTCAAGTCCATCTGTGTCACACTTTTCTGGTTATGTCACTGTCAATGAAGATCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAGCCATCAAACAAGCCCCTCCTCCTCTGGCTTAATGGAGGTCCCGGATGCTCCTCAATTGGGTATGGTGCAGTGGTTGAGATAGGACCTTTTGCAGTCAACAAAAATGGTGAAGGCCTAAATTTCAACACATATGCTTGGAATCAAGATGCTAATTTATTATTTCTGGATTCCCCTGTTGGAGTTGGTTTCTCTTACACCAATACATCTTCTGATCTTACCATATTAGAGGATAGTTTTGTGGCTGAGGATGCCTACAATTTCTTGGTAAATTGGCTACAAAGATTCCCACAATACAAATCGAGGGACTTCTTTATAGCAGGAGAAAGCTATGCCGGCCACTATGTTCCTCAGCTTGCAGAGATAGTATTTGATCGAAATAAGGACACAAACAAATACCCTTTTATTAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACAGAGAATTACTATGATTACAAAGGCCTGCTAGAATATGCATGGAGTCATGCAGTTATATCAGACCAACAATACGACAAAGCAAAACAAGTTTGTGATTTTAAGCAATTTGATTGGTCAAATGAATGCAATCAAGCCATGAATGAAGTCTTCCAAGACTACCAACAAATTGACATATACAACATTTATGCCCCTGCTTGTCATCTAAATAGCACATCCTCAATGGCTAAAGATAGTGACAGTAATAATGATCCTACAAAGGTGATGAAAAATAATTATGGAATAAGGAGGATGAGAATTTTTGGGGGGTATGACCCTTGTTATTCCACATATGCAGAAGAATATTTTAACAAGATTGATGTTCAATCTGCTTTTCATGCAAATAATAGAGGAGGGAACACTAGTGTAACATGGAAGGTTTGTAACAATTCCATATTGAGGACTTACAACTTCACTGTCTTTTCGGTCCTACCAATCTATACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGATGCAGATGGCAGAGTACCTGTGATAGGAACAAGATACTGTGTTGAAGCTCTCGGGTTACCTCTCAAGTCTAGTTGGCGATCATGGTACCACAATGACCAGGTTGGAGGAAGAATTGTGGAGTATGAAGGGTTAACATATGTGACAGTGAGAGGAGCTGGACACTTGGTACCTCTCAACAAGCCCACTGAGGCTCTTTCCCTTATTCATTCCTTCCTAACAGACCAACATCTCCCTACTCATCCCTAA	1479	0.3962	MFGSKMSILATDMSVILLYCLLQSLCFFLLTIPFIKASELNVQNYESDRITDLPGQPSSPSVSHFSGYVTVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPFAVNKNGEGLNFNTYAWNQDANLLFLDSPVGVGFSYTNTSSDLTILEDSFVAEDAYNFLVNWLQRFPQYKSRDFFIAGESYAGHYVPQLAEIVFDRNKDTNKYPFINLKGFIVGNPETENYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQFDWSNECNQAMNEVFQDYQQIDIYNIYAPACHLNSTSSMAKDSDSNNDPTKVMKNNYGIRRMRIFGGYDPCYSTYAEEYFNKIDVQSAFHANNRGGNTSVTWKVCNNSILRTYNFTVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSSWRSWYHNDQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTEALSLIHSFLTDQHLPTHP*	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g1584	492	Gene3D	-	342	380	-	-
	Aev02g1584	492	Gene3D	-	391	484	-	-
	Aev02g1584	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	144	154	IPR001563	GO:0004185\|GO:0006508
	Aev02g1584	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	455	468	IPR001563	GO:0004185\|GO:0006508
	Aev02g1584	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	180	205	IPR001563	GO:0004185\|GO:0006508
	Aev02g1584	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	131	143	IPR001563	GO:0004185\|GO:0006508
	Aev02g1584	492	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 26	22	490	-	-
	Aev02g1584	492	ProSitePatterns	Serine carboxypeptidases, serine active site.	194	201	IPR018202	GO:0004185
	Aev02g1584	492	Gene3D	alpha/beta hydrolase	44	304	IPR029058	-
	Aev02g1584	492	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	22	490	IPR001563	GO:0004185\|GO:0006508
	Aev02g1584	492	SUPERFAMILY	alpha/beta-Hydrolases	50	488	IPR029058	-
	Aev02g1584	492	Pfam	Serine carboxypeptidase	54	484	IPR001563	GO:0004185\|GO:0006508
	Aev02g1584	492	ProSitePatterns	Serine carboxypeptidases, histidine active site.	455	472	IPR033124	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g1584	Aev-Chr2	17471633	17479078	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev02g1584	373	488	Calmodulin-binding Proteins	AT2G22960	31.624	1.90e-13	67.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g1584	K16297		-	gmx:100792930	840.876