Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1581 ATGGCCTCCACCCCTTCTTTTCCCCTACTAGCTAGTTACAAAAATCCCCCATTATTGTTTCATTACCCACCAATGAGTTCTTCTTCACCACCACCTTCCAACTCCTCCACTGAAGCCCTTGATGGCTTGAAATTTGGCCAAAAAATCTATTTTGAAGATGGTATTGGTACCCTTACCAGCACCAATACTAGTCTTATTCAGGCCAAAACAACAACAACTACTACTATTACTCCCTCATCATCATCAACCAAGAAAGGAAGGGTTGGTAATAGTAGTACTGTTCAGGGGGTTCAGCCTCCGAGGTGTCAGGTTGAGGGATGCAAAATAGATCTGAGTGATGGAAAGGCCTATTATTCACGGCATAAAGTTTGTAGCTTACATTCTAAATCACCTACTGTTATTGTCGCTGGCCTTGAACAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCCGAATTTGACCAAGGAAAAAGAAGTTGCCGCAGGAGACTAGCTGGCCATAATGAACGTCGCAGGAAGCCCCCACCCAGCTCTCTGTTAACCTCTCGTTATGCCAGACTTTCGTCTCCTATTATTGATTACGCTGGCAGAGGTGGTGGCGGCTTTCTCATGGAATTTGCTTCGTACCCAAAGATCACTCCGAGAAATGTGTTACCAACTCCGAAACCATCTCATCCTGTTCCTGAGAATCAAAGTGCAACACTTACCTGGCAGGCAAATTCAGAGGCACCACCTGACTTTTTCCTGCAAGGTTCAGTCGTCGGGACGAGCTTCCCTGGTCCCAGACTTCCTCCAATGGATAGCTACGCCGGAGTCACCGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGTGTCCTAGAAACATGGCACCAACTGTTGAGCTGAACAACCTCTTTAATTTCAACTGGACACCCATGACACAAGACGTTGCAGCCGCCCATCAACTTCCGAACACCTCATGTTGTTTCAAGGGAATTGATTCTGCTAACTGCTCAGACGAGGTTGTCGCTGATATCGGTCTGGGTCAAAATCCGCAGCCGCCTCATACCAATCTTCTTGGTGAGCTTGAAGTTCCACAACATGGCAGGAGGATTTACATGGATTTTGGGCAGTCCAGGGCCTATGAATCGCCTCATTAG 1155 0.4684 MASTPSFPLLASYKNPPLLFHYPPMSSSSPPPSNSSTEALDGLKFGQKIYFEDGIGTLTSTNTSLIQAKTTTTTTITPSSSSTKKGRVGNSSTVQGVQPPRCQVEGCKIDLSDGKAYYSRHKVCSLHSKSPTVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPSSLLTSRYARLSSPIIDYAGRGGGGFLMEFASYPKITPRNVLPTPKPSHPVPENQSATLTWQANSEAPPDFFLQGSVVGTSFPGPRLPPMDSYAGVTDSSCALSLLSNQTWCPRNMAPTVELNNLFNFNWTPMTQDVAAAHQLPNTSCCFKGIDSANCSDEVVADIGLGQNPQPPHTNLLGELEVPQHGRRIYMDFGQSRAYESPH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1581 384 ProSiteProfiles Zinc finger SBP-type profile. 99 176 IPR004333 GO:0003677
Aev02g1581 384 SUPERFAMILY SBT domain 100 181 IPR036893 GO:0003677|GO:0005634
Aev02g1581 384 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 26 382 - -
Aev02g1581 384 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 382 IPR044817 GO:0003677
Aev02g1581 384 Gene3D - 92 163 IPR036893 GO:0003677|GO:0005634
Aev02g1581 384 MobiDBLite consensus disorder prediction 75 97 - -
Aev02g1581 384 Pfam SBP domain 102 175 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1581 Aev-Chr2 17441134 17445086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1581 43 382 SBP-box Gene Family AT2G42200 40.437 2.03e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev02g1581 SBP 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1581 - - gmx:100780949 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1251 06 8329039 8331589 Aev02g1581 02 17441134 17445086 PCT