Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1580 ATGGCCCTTCCTCTCTTCCCTGTGATTGTCGCTGCCTCCACAGCGCCGTCGCCCTCGCAGCCGTCGCAGCCTCGCTCTTTCGAACCCTTGGCCTTTCCTTCTCTTCCATCTCTTCCCTTCCTCGTCTCTGGTTCGCTCGCCTCTGTTAAGAACTATAGTTGGAGTTGCAGGTCCATGGCTGTCTCACTGTGGAGAGCACGTGCAGTTTCCTCAATTCTTGCCAATATTGCTAATGCCTCTCGCTGTTTCTCTTCCGATGTTATTTCAAGTACAAATGCACATAATCCACGCGAGAGTATGATGAATCAAATGATGTATTCTGACATAAATTCACGAATTGGGAGCTGTATGCCATTATCTGCAATGCGAATTGGAACCATCATTCACAACATTGAGTTGAACCCAGGGCAAGGTGGCAAACTAGTCCGATCAGCTGGAACTAGTGCAAAGATCCTGAAAGAGCCCACATCAAGTTACTGTTTGATACAACTCCCTTCAGGTGTTAAAAAACTGATTGATTCTCGCTGCAGGGCCACCATCGGTACGGTGTCTAATCCAAGCCATGCAGATAAAAAACTTAGGAAAGCTGGACACAGCCGATGGCTTGGTCGAAGACCAGTTGTTCGAGGTGTGGCCATGAATCCCGTAGATCATCCTCATGGTGGTGGAGAGGGTAAGAGTAAGAGTAGCGGTCGGTGGGGGCGAGGATCTCGTACTCCTTGGGGCAAGCCAACTAAGAGTGGCTATAAGACTGGACCCTTAAAGCGCAGAAGGTAG 777 0.4942 MALPLFPVIVAASTAPSPSQPSQPRSFEPLAFPSLPSLPFLVSGSLASVKNYSWSCRSMAVSLWRARAVSSILANIANASRCFSSDVISSTNAHNPRESMMNQMMYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRSAGTSAKILKEPTSSYCLIQLPSGVKKLIDSRCRATIGTVSNPSHADKKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGRGSRTPWGKPTKSGYKTGPLKRRR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1580 258 PANTHER RIBOSOMAL PROTEIN L2 76 258 IPR002171 GO:0003735|GO:0005840|GO:0006412
Aev02g1580 258 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 76 258 - -
Aev02g1580 258 MobiDBLite consensus disorder prediction 212 258 - -
Aev02g1580 258 TIGRFAM rplB_bact: ribosomal protein uL2 107 255 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Aev02g1580 258 Gene3D Ribosomal protein L2, domain 3 184 258 IPR014726 -
Aev02g1580 258 SUPERFAMILY Translation proteins SH3-like domain 113 247 IPR008991 -
Aev02g1580 258 SMART Ribosomal_L2_C_2 111 244 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aev02g1580 258 Gene3D - 107 183 IPR014722 -
Aev02g1580 258 Pfam Ribosomal Proteins L2, C-terminal domain 113 242 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aev02g1580 258 ProSitePatterns Ribosomal protein L2 signature. 206 217 IPR022671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1580 Aev-Chr2 17425960 17428082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1580 103 223 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 42.636 1.06e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1580 - - lang:109347761 325.094