Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1554 ATGGATTCAAATACAAATACACTTCATGGTTATCAACCCCATCAGCACCATCATCAACAACAAAACTCTGGGTTGCTACGATTCCGCTCAGCGCCGAGTTCACTTCTCGCGAATCTCACACCACCTCCTTGTGGCGGCGAATCCCAAATAGAGTTGGTTTCGAGATTTGGGGGTAATAACAATAATAATAGCAGCACCAGCACAAGCACCAGCAACGACACCGTTTCACCTAGGTTTCGAGAATTTGAAGACGTTGAATTCAAGGGTGGTTGTGATTCTACTAAGGGTTTGAGTCTTATGATGAATTCTCACCAACATGGGTATGGCGGTGGTGTTGGGTTGCCACCTCATTACCCAAGACACGATTCTTCTTCTGCGTTTGATGGTTCATATGGGTTGGTTTGTGGTGAAAATCAGAAGGGATTATTTGATTCTTCTTCTTCTTCTTTCTCCAATCTTCTCAGACAGAGTAGCTCCCCTGCTGGTCTTTTCTCCAACATCATTTCCTTTCCAAATGGGTTTGCCACCATGAAAGGTGTTGAAAACTATGGTTCAGCTAATAGCAGTAATGGTGAACTTAGTCCATCAATGAACAGATTGAAGAATCAGATCAGCTTCTCATCAAGAAGTGGTTCTTCCTTGGGAATTTTGTCACAGATATCTGAAATAGGGAGTGAAGACATTGGAGCAACTAGCCCTGATGATGGGAGGCAGGGAGGTAGCAATGGTGGTGATGCTACACAATATGGCCCTGGATTCCCCTATGGTTCTTGGAATGATACTCCACAACTCTCAGAAAATTTCACTGCCATGAAAAGAGGGCAAAATAGTAATGAAAAATTATTTTCTGATGTTCAGAATGGAGAGCTAGGAAATCAAGCTCATGTTCTGTCACATCACTTGAGCTTGCCAAAAACTTCCTCAGAGATAGTTGCAATGGAGAAGTTGCTTCAGTTCCCAGATTCTGTTCCTTGTAAAATCAGAGCAAAGCGAGGCTGTGCTACTCATCCTCGAAGCATTGCTGAAAGGGTGAGAAGAACTCGGATCAGTGAACGAATGAGAAAACTGCAAGAGCTGGTTCCAAACATGGACAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTGGACTACATCAAAGATCTCCAAAAACAATTCAAGAGCCTAAGTGAAAAAAGGGCAAATTGCAAATGTATAAGCATGCAGAAGGCAGACACAAATCAAAATGCTTAA 1236 0.4288 MDSNTNTLHGYQPHQHHHQQQNSGLLRFRSAPSSLLANLTPPPCGGESQIELVSRFGGNNNNNSSTSTSTSNDTVSPRFREFEDVEFKGGCDSTKGLSLMMNSHQHGYGGGVGLPPHYPRHDSSSAFDGSYGLVCGENQKGLFDSSSSSFSNLLRQSSSPAGLFSNIISFPNGFATMKGVENYGSANSSNGELSPSMNRLKNQISFSSRSGSSLGILSQISEIGSEDIGATSPDDGRQGGSNGGDATQYGPGFPYGSWNDTPQLSENFTAMKRGQNSNEKLFSDVQNGELGNQAHVLSHHLSLPKTSSEIVAMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQFKSLSEKRANCKCISMQKADTNQNA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1554 411 MobiDBLite consensus disorder prediction 1 24 - -
Aev02g1554 411 SMART finulus 339 389 IPR011598 GO:0046983
Aev02g1554 411 MobiDBLite consensus disorder prediction 53 76 - -
Aev02g1554 411 MobiDBLite consensus disorder prediction 226 255 - -
Aev02g1554 411 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 398 IPR036638 GO:0046983
Aev02g1554 411 MobiDBLite consensus disorder prediction 36 76 - -
Aev02g1554 411 Gene3D - 334 406 IPR036638 GO:0046983
Aev02g1554 411 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 403 - -
Aev02g1554 411 PANTHER TRANSCRIPTION FACTOR BHLH130 16 403 - -
Aev02g1554 411 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 383 IPR011598 GO:0046983
Aev02g1554 411 Pfam Helix-loop-helix DNA-binding domain 338 384 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1554 Aev-Chr2 17201032 17205301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1554 1 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 47.716 2.10e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g1554 HLH 4.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1554 - - aip:107625483 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1554 02 17201032 17205301 Aev02g1554 02 17201032 17205301 ECH
Aev02g1554 02 17201032 17205301 Aev10g1757 10 19612278 19614493 ECH
Aev02g1554 02 17201032 17205301 Aev04g3218 04 31496560 31499827 ECH