Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1551 ATGGAGCGCGCCACACTGGATTCCATCCAATTCAACGAAGAAATCCAGGGGCTCATGGCTCCGGCGCCGGAATCCGCTGCCAGCTCCTTCACGGCGTTGCTTGAGCTCCCGCCGCCGCAGGCTGTCGAGCTCCTCCACTCGCCTGAGCGTCTTTCCGCCGGAAAACCGCACTGCCACTTCAGTAACCCGAAACCCTACCCCTTACTGACCTCCTTCAACGGCGGAAGCAGCAACCTGACCTTCCCTTCCAACGCCGCGCTGATCGAGCGCGCCGCCAGGTACTCCGTGTTTGCCGGTGAAGGACCGCCGCCTCCGGCGGAGGTGAAGGACGAGCCGATGGAGACCAATTCGAACCCAAGTTCGACTCAGTGCGGCTGCGTCTCCGATCCCGCGGTCGAGAACAAGGGTGCGAAGAGGAAGGAGCCAGAGAAGAAGGTTAAAGCGTCTTCGAAGAAGAACAAGAGCGTCGCCGGTGGCGAGAGCTCCGGCGACGGCGAGAAGCTTCCGTACGTTCACGTTCGCGTTCGTCGAGGTCAAGCCACCGATAGCCACAGCTTAGCTGAAAGGGCTAGGAGAGAGAAGATAAATGCACGGATGAAGCTTTTGCAAGACCTGGTCCCCGGTTGCAACAAGATATCAGGAACGGCATTGGTTCTGGATGAAATCATTAACCATGTGCAATCTCTACAGCGTCAAGTGGAGTTTTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATTGATTTCAACCTTGACAGCATATTGGCTAATGAAGGGGCATCTCTAATGGACGGTAACTTCCCAAGCATGGTTCCACACGTCATGTGGCCAGAAATCCCAAACAATGAAAATAGGGAGCAATATCAGCAACCATGGCAGTTTGATGCATTCCACCAACCACTTTGGGGGAGGGAAGAAGACAACCCTAATTTCATGACCCCGGAAAACTCACTTTTGAGTTATGACTCACCGGCTAATTCAGTATCCCTGCATTCAAATCAGTTGAAGATGGAGCTCTGA 1020 0.5402 MERATLDSIQFNEEIQGLMAPAPESAASSFTALLELPPPQAVELLHSPERLSAGKPHCHFSNPKPYPLLTSFNGGSSNLTFPSNAALIERAARYSVFAGEGPPPPAEVKDEPMETNSNPSSTQCGCVSDPAVENKGAKRKEPEKKVKASSKKNKSVAGGESSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQDLVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDFNLDSILANEGASLMDGNFPSMVPHVMWPEIPNNENREQYQQPWQFDAFHQPLWGREEDNPNFMTPENSLLSYDSPANSVSLHSNQLKMEL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1551 339 Pfam Helix-loop-helix DNA-binding domain 183 230 IPR011598 GO:0046983
Aev02g1551 339 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 339 IPR024097 GO:0006355
Aev02g1551 339 Gene3D - 176 249 IPR036638 GO:0046983
Aev02g1551 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Aev02g1551 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 248 IPR036638 GO:0046983
Aev02g1551 339 SMART finulus 185 235 IPR011598 GO:0046983
Aev02g1551 339 Coils Coil 219 239 - -
Aev02g1551 339 MobiDBLite consensus disorder prediction 133 150 - -
Aev02g1551 339 MobiDBLite consensus disorder prediction 113 128 - -
Aev02g1551 339 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 339 - -
Aev02g1551 339 MobiDBLite consensus disorder prediction 98 170 - -
Aev02g1551 339 CDD bHLH_AtBPE_like 169 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1551 Aev-Chr2 17167735 17174260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1551 6 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 51.459 2.12e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g1551 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1551 - - aprc:113872810 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1551 02 17167735 17174260 Aev02g1551 02 17167735 17174260 ECH
Aev06g1272 06 8468608 8473542 Aev02g1551 02 17167735 17174260 PCT