Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1546 ATGTTTGAGTTGCTTAGGTGGGGCGGTCTCCGATCATCTCGCGGAGATAACAGTGCACGGTTGGTGCAGTATCGACGGATACTGGATTTCATCTCTATGGATGGGTTCCGATGGACACCATATTCTGACATGGACGTGATGCAGATTGTTCCGGATCATGTCCAGCAGCACTCTGTGCTGTTTCGTTCAGTTATTCCCTTGCTTTCATTCGAGATAGTAGAGTATCATCAGCCTGATCGTGTGTTGAGGCAGTTCCACATGATGCAGCATATGCCATCTCCTCCGGCTGACCTCAGCCGCGTTCATGGCATTGATGGGAGAGGACGTCCCTCGAGATGGTGGCCGAGGGAGCACAGAGATTATTATGATATATGGGGAGATCGATACGATCGTGTGTTCACTGGGATGATGACACATGATTATCGTCCTTCAGCAGAGTATCTTCAGTGGTGGTCCTTGAGTCCGTTTAGATATCTAGGCGGAGGTCCCCCTGGCCCAGAGGAGATCCCTCCAGGGTTGCCTGATGGAGTTGGCGTTGCTGCAGGTCCTCAGATTCCACACCCACCAGCAGCCCCTGATAGGAGACGTGCACGCACGAGAGCACGAACGGGCACACGTCAGAGCAGACGCCAGTACCCTATTGGGACTGCGGATGTGGGTGACTACTTTATTCCGCGCCAGACCCAGACTCAGACGCAGTCGCAGACTCGGCCGCAGTCCCGGATTAGTACCCAGATACCACCGCAGTCCCAGGTGCCCCAACAGTCGCATGTCGCACCGGATACGCAGACAGAGATGCACTTTGAGTCTAGGGTAGCTGCTGGAGGATCTATGTTTTTTGCTGGATTATCGTCAGATTGGAGGAGTGGTCCTGGGCAGAGCTCGCGCGATGCACCTGGATCGAGCTCGCGCTATGCATCTGGATCGAGCTCGCAGGCTGCAGCAGGGGGAGACGGTGATTGTTATAGGCCGACGATGGAGTCAGTGGACGATATTGGTATATCCATCACTGATGATGATCTTGATATGTTTGATGCATATCTTCGTCGACAGCTCCATAGCGGTGGCGATGAACTTACACTGTCATTTGCACAAAAATATCGAAGACGATTACCTAGTCAAATCAAATTCAAAACTCCGTCCGGAAAAGAATGGCAAATAAAATGTGCAAAAAGAGGTGACAAGGTATGGTTCACAGACGGTTGGAAGGATTTTGTACAACATTTTTTAATGTGTTATGGTTACACGGTATGGCTCCACTATGATGAAGAAAATACATTTGACGTTGAGAAATTTGACGAAAATGAGGTTGAAGTCTCGTACGACTCTGAAGGAGATGAAGGAGACAATAGTTTAGCTGACGACTAA 1368 0.5022 MFELLRWGGLRSSRGDNSARLVQYRRILDFISMDGFRWTPYSDMDVMQIVPDHVQQHSVLFRSVIPLLSFEIVEYHQPDRVLRQFHMMQHMPSPPADLSRVHGIDGRGRPSRWWPREHRDYYDIWGDRYDRVFTGMMTHDYRPSAEYLQWWSLSPFRYLGGGPPGPEEIPPGLPDGVGVAAGPQIPHPPAAPDRRRARTRARTGTRQSRRQYPIGTADVGDYFIPRQTQTQTQSQTRPQSRISTQIPPQSQVPQQSHVAPDTQTEMHFESRVAAGGSMFFAGLSSDWRSGPGQSSRDAPGSSSRYASGSSSQAAAGGDGDCYRPTMESVDDIGISITDDDLDMFDAYLRRQLHSGGDELTLSFAQKYRRRLPSQIKFKTPSGKEWQIKCAKRGDKVWFTDGWKDFVQHFLMCYGYTVWLHYDEENTFDVEKFDENEVEVSYDSEGDEGDNSLADD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1546 455 MobiDBLite consensus disorder prediction 287 314 - -
Aev02g1546 455 Gene3D - 337 436 IPR015300 -
Aev02g1546 455 Pfam Plant mobile domain 5 152 IPR019557 -
Aev02g1546 455 SMART B3_2 344 435 IPR003340 GO:0003677
Aev02g1546 455 ProSiteProfiles B3 DNA-binding domain profile. 359 435 IPR003340 GO:0003677
Aev02g1546 455 CDD B3_DNA 362 433 IPR003340 GO:0003677
Aev02g1546 455 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1 16 158 - -
Aev02g1546 455 MobiDBLite consensus disorder prediction 162 264 - -
Aev02g1546 455 SUPERFAMILY DNA-binding pseudobarrel domain 343 435 IPR015300 -
Aev02g1546 455 Pfam B3 DNA binding domain 360 427 IPR003340 GO:0003677
Aev02g1546 455 MobiDBLite consensus disorder prediction 284 322 - -
Aev02g1546 455 MobiDBLite consensus disorder prediction 223 263 - -
Aev02g1546 455 PANTHER PROTEIN MAIN-LIKE 2 16 158 IPR044824 GO:0010073|GO:0048507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1546 Aev-Chr2 17118783 17121088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1546 363 445 B3 DNA Binding Superfamily AT3G18990 30.120 2.78e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev02g1546 PMD 2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1546 - - gra:105767323 112.849