Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1539 ATGCTTGCAGGTGGTCATAATTTGATGGAGTCTCATGATGAGACAGGATGCCAGGCTCCAGAGCGTCCCATACTTTGCATTAATAATTGCGGTTTCTTCGGAAGGGCTGCTACCATGAATATGTGTTCCAAATGTTACAAGGACATGCTGTTGAAGCAAGAACAGGACAAGCTTGCAGCAGCATCGGTTGAAAGCATCGTGAATGGTGGTTCGAGCAGCAATAGTAAACCGACTCTGAGCGTCAGTGCTACGAATATACAAGTTGGAAATGTGGAGGTCAATACAGTCTGTGCTGAGATTTCTGCGGATTCATCGTCTGGTGAGAACGTGGAGATGAAAGCCAAGGCAGGCCCTAGCAGATGTGCGACTTGCCGGAAGCGTGTCGGATTGACTGGTTTCAGCTGCAAATGTGGAAACCTCTTCTGTGCTATGCATCGCTACTCCGACAAACACGATTGCCCCTTTGATTATCAGACTGTTGGTCGGGATGCTATTGCGAAAGCGAATCCTGTAGTTAAGGGTGATAAGCTTGATAAAATATAG 543 0.4696 MLAGGHNLMESHDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAAASVESIVNGGSSSNSKPTLSVSATNIQVGNVEVNTVCAEISADSSSGENVEMKAKAGPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHDCPFDYQTVGRDAIAKANPVVKGDKLDKI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1539 180 Pfam AN1-like Zinc finger 121 158 IPR000058 GO:0008270
Aev02g1539 180 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 10 180 - -
Aev02g1539 180 ProSiteProfiles Zinc finger AN1-type profile. 115 161 IPR000058 GO:0008270
Aev02g1539 180 Gene3D - 9 81 - -
Aev02g1539 180 Gene3D - 95 176 IPR035896 -
Aev02g1539 180 ProSiteProfiles Zinc finger A20-type profile. 20 54 IPR002653 GO:0003677|GO:0008270
Aev02g1539 180 SMART A20_3 23 47 IPR002653 GO:0003677|GO:0008270
Aev02g1539 180 Pfam A20-like zinc finger 24 47 IPR002653 GO:0003677|GO:0008270
Aev02g1539 180 SUPERFAMILY AN1-like Zinc finger 109 175 IPR035896 -
Aev02g1539 180 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 180 - -
Aev02g1539 180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 25 62 - -
Aev02g1539 180 SMART AN1_Zf_4 121 158 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1539 Aev-Chr2 17067007 17067549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1539 13 180 C2H2 Transcription Factor Family AT3G52800 44.970 6.88e-41 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1539 02 17067007 17067549 Aev02g1539 02 17067007 17067549 ECH
Aev02g1539 02 17067007 17067549 Aev10g1763 10 19664461 19664982 ECH