Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1536 ATGACTCCGTCTCCGGGGCGGCGGCCTCCACGGGCTCCTGATCAGAAGATGGAGGGTCGGGGTCACCGGGAGTCGCGAGTGTCGCCGGTGGGGGTTCTCAGCTCCTCATTCTCATCAAGGTCAGATAGGAGTACTACAAGAAGTCACAACCACACAAGATTTAGGGGTGGAGAAATTGTTCTATGTGATTGTGGGTTAAAGCTTCTTCTAGAGCTTTCCATGGAGAGTAACAAGATGGAAGACTATGAAGTGATACAACAACTTGGAAGAGGAACATTGGGTGCCACTTTTCTTGTTCTCCACAAAACTGAGAGACAAAGGTATATGCTGAAGAAGATTCGCTTGGCCAAGCAAACAGATAAGTCCCAGCCAACACCACACCAAGAGATGAGCCTGATTGCAAAACTAAACAACCCATATATTGTGGAGTGCAAAGATGCTTGGGTGGAAAAGGAGGACTTTATGTGCATCATAACTGGCTATTGTGAAGGAGGTGACATGGCTCAGTATATAAAGAAAGCTCGAGGATCATTCATTGCTGAGGAGAAAATTTGCAAATGGATGACTCAATTGTTGCTAGCTGTGGACTACCTTCACTCTAATCGTGTGCTCCACAGAGATCTTAAGTGTTCCAACATATTACTCACCAAAGACAATAACATTCGGCTAGGTGACTATGGTCTTGCAAAGCTACTTAATCCAGAAGACCTTCCTTCACCGGTTGTTGGGACACCGAACTACATGTGCCCTGAGCTCCTTGATAAGACACCTTATGGTTATAAATCTGATATATGGGCCCTTGGTTGCTGTATGTTTGAAATTTCTGCACATCAACCGGCTTTTCGTGCACCAGACATGGCGGGACTAATCAATAAAATAAATAGATCCTCCATTTCTCCACTGCCAATTGTATACTCTCCCACCCTGAAACAACTTATCAAAAGCATGCTGAGGAAAAATCCAGAACATAGACCAACAGCAGCTGAGTTGCTAAGGCATCCTCATTTACAACCTTATGTTCTTCGCTGTCGTAATGCATCAAAAACTGTTTTTCTGCCAGTACATCTCATAAGTAGTAACTTAAAAGATAAAACAAAAAGAAGTAACAAATCTAGTGGTGGCAAAGATCATAGAGACAAAGAAGAAGGATTAGTAAATCATATGGACCGGGTTCATCCGATGGAGGGAAGTGGAGATGTACATGTAAGCAATCATTCTAATAATGGCAGGCTAACAGTCTCAAGCAGTGCAGAAGACAACCTTGAGACCAAGATGGTTGATCCTACCAGCTACAAAACGGAAACTTCAATTAGTATTAGTGGCTCAAAAGATGGGTCAACAACATCTGAATCAACCATTTGCAGTGTGTGCAAGGAAGCAGACTTTAAGAGTAGACTTTCAAAGGAAACAGCTGATAGTGAGATCACATCAAAGAGTACACCAGATTCTGCACATGAAGAACATGGAGTTGCTGCAGAACATTTTCTGCAGTCAGATGCAGGTAACATAACCGTAACAGCAGCAAAAGTTGAAGACCCTCTTTCAAATGAAAGTTCTGATAAAACCGTCACACTGAGGGAAGATGCGAAACCTGAGGAATCCTGTAAATCAATAATGTCCAGTGAAGAGAGCTCCAGCAGAGATAAAGACGGGTTTGTTGACGAGGAAACGTCATCATCATCACCAGTTATGCATCCTATCAGGGCTGAACATGAAACCACTGAATCTGGAAGCTGCTTGAAGAAAACTGAAAAGTGTGATGCATGCACAGAATCCTCTCACATGGACTGCGTGTCACATGCGAGTAATGATACGCTTCCAGGTAAGGATGAAAGTTGCGCGAACACACATACCATCAATTTTTCCGCACAAAAAGAAGAAAACAGCAATGCTGTGGTTGTTGATAAGACACCAAATCCAAATGGCATTTCATTAAGTACTTCAAAAGTTGGTGATGGGAAAAAGAGTGTGCTGATTAGTAGCTGCCAGAATAGAGCAGATGCACTGGAAGCTCTGCTTGAGTTATGTGCTCAACTGCTTAAGCAAGGGAAACTTGAAGAGCTAGCTGCTGTTCTAAGACCATTTGGTGAAGACACAGTCTCATCCAGAGAGACAGCAATATGGCTGACAAAAAGCTTACTTTCCTCACAAAAATTCCATCCGGAAACATAG 2172 0.4309 MTPSPGRRPPRAPDQKMEGRGHRESRVSPVGVLSSSFSSRSDRSTTRSHNHTRFRGGEIVLCDCGLKLLLELSMESNKMEDYEVIQQLGRGTLGATFLVLHKTERQRYMLKKIRLAKQTDKSQPTPHQEMSLIAKLNNPYIVECKDAWVEKEDFMCIITGYCEGGDMAQYIKKARGSFIAEEKICKWMTQLLLAVDYLHSNRVLHRDLKCSNILLTKDNNIRLGDYGLAKLLNPEDLPSPVVGTPNYMCPELLDKTPYGYKSDIWALGCCMFEISAHQPAFRAPDMAGLINKINRSSISPLPIVYSPTLKQLIKSMLRKNPEHRPTAAELLRHPHLQPYVLRCRNASKTVFLPVHLISSNLKDKTKRSNKSSGGKDHRDKEEGLVNHMDRVHPMEGSGDVHVSNHSNNGRLTVSSSAEDNLETKMVDPTSYKTETSISISGSKDGSTTSESTICSVCKEADFKSRLSKETADSEITSKSTPDSAHEEHGVAAEHFLQSDAGNITVTAAKVEDPLSNESSDKTVTLREDAKPEESCKSIMSSEESSSRDKDGFVDEETSSSSPVMHPIRAEHETTESGSCLKKTEKCDACTESSHMDCVSHASNDTLPGKDESCANTHTINFSAQKEENSNAVVVDKTPNPNGISLSTSKVGDGKKSVLISSCQNRADALEALLELCAQLLKQGKLEELAAVLRPFGEDTVSSRETAIWLTKSLLSSQKFHPET* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1536 723 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 559 706 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 509 576 - -
Aev02g1536 723 Pfam Protein kinase domain 82 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev02g1536 723 MobiDBLite consensus disorder prediction 29 43 - -
Aev02g1536 723 ProSiteProfiles Protein kinase domain profile. 82 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev02g1536 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Aev02g1536 723 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 76 560 - -
Aev02g1536 723 Gene3D Phosphorylase Kinase; domain 1 66 161 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 400 450 - -
Aev02g1536 723 CDD STKc_Nek 81 336 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 1 50 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 11 25 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 362 384 - -
Aev02g1536 723 SMART serkin_6 82 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev02g1536 723 MobiDBLite consensus disorder prediction 396 450 - -
Aev02g1536 723 Gene3D Transferase(Phosphotransferase) domain 1 164 395 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 465 488 - -
Aev02g1536 723 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 76 560 - -
Aev02g1536 723 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 559 706 - -
Aev02g1536 723 MobiDBLite consensus disorder prediction 521 555 - -
Aev02g1536 723 SUPERFAMILY Protein kinase-like (PK-like) 77 359 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1536 Aev-Chr2 17028925 17044642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1536 88 337 MAP Kinase Kinase Kinase AT1G53570 30.588 2.11e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aev02g1536 Pkinase 4.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1536 K08857 - gmx:100793379 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1536 02 17028925 17044642 Aev02g1536 02 17028925 17044642 ECH
Aev06g1281 06 8523262 8527789 Aev02g1536 02 17028925 17044642 PCT