Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1362 ATGATTCAAAAACAGGATATGGAGCCAATGGAAATTGACCATATTGTGGATATTCCTGATACTCCAGATAGATTAACAACCAGGCATGATAATTCTGAGAAGAGAGACAGGCGATTTCAAGTTGCTGATGAAATGAATGGATGCAGCAACTATATTACAATGTCCCCTGTAGAGAAACCTCGTCCTTCTCAAAATTATCCAATCTTTAGGAGAGCCCAAACTGATAGAATATTTGGACTTGGGAGAACACATTCTAATGGAGCTGAAAAGGTGGATAAAGGGAAAGCTAAAATCTCTAGGTTTCCCTCAAAATCATCACACCATGGGCCTACACCGGTTTTAGATTTGACTAAAGAGAATGGACAGTCCCAAAAGCTGCATCGGGGATCAAGAGATAATGCAACTGAAGACAAGAAAGAACTGAAATCAAGCACTGGAAACATTCCTCTACGGTTCATTGCTGATTCCTCTAATACATCTAGAAATAGAACACTTGCAGGTTCATCTAATATGGCATTGGACCGTGGCAAGAGCATTGCTCTATCTAGTGATTCTCAATCTCAGCTAAAATCTGAAAAGCAAGTGTCTTTGCCTCCTCACATCTCTCCCCCTCCTAGAGGTAGAGGCCAGAAGAGATTGGTACGAAACGGGTGCATTTCACCACATAATATTGCTACAAGGGAAAAACAATCTATTGGACAGGGCAGTCATCGGACCAATGATGTTAAAGAGAGTCATGCTAGGGATTTGGTTTGTAGCAATACAATGCCAATGGTTAGTGTTGAAGATATAGTTTCTGAAGAGAGAAGCATTAATAGAGTAAAAGGAAAGCAAGTACTTGTTCATCCTTCATCACTAGGACATAATGCTCACACCATTCGCACTGCTAGCAGCAGCCTTGTGATTGATACTGAAGGAGCCAATGGAACCAATACTGATATGAGGAATTCACTTAGATACTCTGGGGAACATGGTTGTAGAACTACACTCAATGAGCAAAACAACGAGCAGAGCTTGTATGATGTAAACAGGCATAATTTTAGGAGAAATTATGATGTTGGAAGATTGATAAATAGACAAAATATGAACAGAATGGACAAAAGAGATACTCAGACCAGTCAAAGCAGCAAGGATGTATGTGGTTCTTCTCTCTCAGATCATGCAACCCAAGGAGCTTCATTGACAATTCAAGAGGTAGGCCAGTTGACTCCAACTCGTCCTACCTCGGGCACACTGACTAAAAGACCAAGAAAACGTGGATCTACCTCAGCAGGTCCTAATGAAGCATCACTTAATTCAGAATTAATATTTATCAGTCCATCTGGAGAATCATCAAGCTCATCCCGTGGCCCTGGCTTGGAACCTGATATTGTTGACTTGTCATCTGAACCAAGGTTCACCAACAGACTTTCTGAAGGCTTAGATGATGGTGATGATAATAGCTCAGAAGCTCGGGCAAGACAAGTAGAAGCAGATGAGATATTGGCACGTGAACTCCAAGAACAACTTTATCATGATGGTGATTCTTTTGATGGAAGAGGGTTTGATGAACATTTAGCATGGGAGCTGCAGCAAGAGAATGATCTTATGCATACAACATCTACTGATAATCACCATATATCACATCCTCTATGGTTTCAAAGGGCAAATAATCAGCCTCGTACACGATCTCATCAAATTCCGTCTAATAGGAGAAGAGCTGTGCCTCAAGTTCCTTTTTCTAATAGAATGTCACAGTTGAGGAGTCGCGTTGTCAGTCGATCTCAAGCCCCTACCAGATCATCCAGAGGACGACGCCCACGGTTTCCCGTGGATATGGACTTAAACATGCGGCTTGATATATTGGAAGCATTAGAGGATGCTGTAGGGGATTTTATGGATACAGGAGTGGCTAATGACATCTTTCATGTTCCACATGATTTCAATGAAAATGATTATGAAATGTTGTTGGCTCTTGATGAGGAAAATCACCGGCATACTGGTTCGTCCTCCAATCAGATCAATAACTTGCCGCAATCCACTGTTCAGACTGACAACTTCCCGGAGGCATGTGCTATATGTCTGGAGACCCCAGTCAAGGGAGAAGTTATTCGCCATCTTCCTTGTTTACACAAATTTCACAAAGATTGCATTGATCCTTGGTTGCATAGGAAAACGTCATGCCCAGTTTGCAAGTCATCCATCACCTAA 2190 0.4174 MIQKQDMEPMEIDHIVDIPDTPDRLTTRHDNSEKRDRRFQVADEMNGCSNYITMSPVEKPRPSQNYPIFRRAQTDRIFGLGRTHSNGAEKVDKGKAKISRFPSKSSHHGPTPVLDLTKENGQSQKLHRGSRDNATEDKKELKSSTGNIPLRFIADSSNTSRNRTLAGSSNMALDRGKSIALSSDSQSQLKSEKQVSLPPHISPPPRGRGQKRLVRNGCISPHNIATREKQSIGQGSHRTNDVKESHARDLVCSNTMPMVSVEDIVSEERSINRVKGKQVLVHPSSLGHNAHTIRTASSSLVIDTEGANGTNTDMRNSLRYSGEHGCRTTLNEQNNEQSLYDVNRHNFRRNYDVGRLINRQNMNRMDKRDTQTSQSSKDVCGSSLSDHATQGASLTIQEVGQLTPTRPTSGTLTKRPRKRGSTSAGPNEASLNSELIFISPSGESSSSSRGPGLEPDIVDLSSEPRFTNRLSEGLDDGDDNSSEARARQVEADEILARELQEQLYHDGDSFDGRGFDEHLAWELQQENDLMHTTSTDNHHISHPLWFQRANNQPRTRSHQIPSNRRRAVPQVPFSNRMSQLRSRVVSRSQAPTRSSRGRRPRFPVDMDLNMRLDILEALEDAVGDFMDTGVANDIFHVPHDFNENDYEMLLALDEENHRHTGSSSNQINNLPQSTVQTDNFPEACAICLETPVKGEVIRHLPCLHKFHKDCIDPWLHRKTSCPVCKSSIT* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1362 729 PANTHER - 484 727 - -
Aev02g1362 729 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 484 727 - -
Aev02g1362 729 MobiDBLite consensus disorder prediction 469 487 - -
Aev02g1362 729 MobiDBLite consensus disorder prediction 576 595 - -
Aev02g1362 729 Pfam Ring finger domain 683 725 IPR001841 -
Aev02g1362 729 MobiDBLite consensus disorder prediction 576 602 - -
Aev02g1362 729 MobiDBLite consensus disorder prediction 81 145 - -
Aev02g1362 729 MobiDBLite consensus disorder prediction 358 487 - -
Aev02g1362 729 CDD RING-H2_PA-TM-RING 684 725 - -
Aev02g1362 729 MobiDBLite consensus disorder prediction 181 213 - -
Aev02g1362 729 ProSiteProfiles Zinc finger RING-type profile. 684 725 IPR001841 -
Aev02g1362 729 MobiDBLite consensus disorder prediction 121 144 - -
Aev02g1362 729 SUPERFAMILY RING/U-box 683 728 - -
Aev02g1362 729 SMART ring_2 684 724 IPR001841 -
Aev02g1362 729 MobiDBLite consensus disorder prediction 374 451 - -
Aev02g1362 729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 650 729 IPR013083 -
Aev02g1362 729 MobiDBLite consensus disorder prediction 181 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1362 Aev-Chr2 14687748 14697705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1362 469 729 C3H Transcription Factor Family AT1G04790 44.755 2.73e-64 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1362 - - aprc:113872307 871.692