Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1274 ATGGGAAACACTAAGTGGGTGAGCGAGCAACCATGTGCGAATGCGAGAGTCGGGGATGGGAAACACTGGAGTGGGAAATACTGTTATCCAGGTTTGTCTGAGAGTGAGCTTACCTTCCCACCTGTTAGGGTATGGGATGGGAGGCAATGGGTAGCAGAAGAAAACCATAATAACAGGAAGTTGCGCTATGGTGATGATGACAGGAAAAGGAGCGAATATGGTGAGTGGACACTGGTATCCAGGAAGAAAAAGAATCCCCAGCCCGCACAATTCCAATGGAATAGTAAAGAGCAAACAGTAGCAAGAATGAAGACTATTAAGGGACAACAGGATGAGAGAAGAGCTCATACAGTATTTGTCGATGGGATTGAAGAATCCACTTCTAAAGGCCTACTCCGCTATGCTTTTGGATGGAGTGGCAAGATAGTGGACATTTATATATCGAGGAAGAAGAGGAAGGGGAGAAAAGACTATTTTGCTTTCATTCGCTTTGAAGACAAGGGAGGTGCTGTAAGGGCTATTGAGAAGATGAATGGTGCAATAGTGAATGGAAGGAGAGTGCTAGTTAAGGAAGCCAGCTATAACAGGAGGACAAATGAAAAGAGGGTTGAAAGCAGAGAAATCATACAACTAGGAGAACCACGACAAATACATCAGAATGAGACTGGCCATGGGGGTCTCAGGGCTCCAAAGAGTGGCCCTAAGAAGGAGGAAGTTTTGAACACAAAAACTTGTTTTCTGAAGGAGGTATGTGTGGAGGCTTGTAAGGACCAAGTTGAGTGGCTCCAAAAAAGCTTGGTTGGGGAAGCTACGAACCCTCTATCGTACAACGATTTGTTGAAGAGATTGGAGGGGTGGAGTGGTCCAAAAATTGTTAAGTGCAGTGAGTTAGGGGCCTTTAAATGTTTAATTACATTTGAAAGTAAAGAGGGTTTGGAGGAAGCTATGGAGATGGATTCATTCTTTGAGTTATTGGAAGGATGTCTTGATAACTTGAAGCCTTGGTCTTCGGAAGTGTGGTGTGGTTCACGAAGAGTTTGGTTGGAGGTGTTCGGCGTCCCGGTGCATGCATGGAGCAAAGATTCTTTATCAAAGATAGGGAGCTTGTGGGGGGAGACTGTGATGTTGGATATTGATACGGAGAATGGGAAATCCTACAGTGTGGCCAGAATCCTTATTGATACATTCCAAAGGAATCCAATATGTGAAGAGATTTGTGTAAAATGTGATGGAATTCCTTATAGATCTTACGTTAAGGAATTTGGGCAAGATATGTATGGGATTCAGTGTTTTATCAGTCAACCATGTGAAAATGAATCTATGAAGGAAGTGGCAGAGGATGGGGATGAGGAACAAGAAACTGATGATCAAGGATTGCAAACGTTAGCTCCGATAGCTCCGGTGGCCGGTGATGGAGAGGCACTGAAGAATCAAAAGCATACTGCCAATGATGGTTCATTGGGCTCTGCGCAGATTGTGTCTGCTCCCCGAGGAGGCGTGGACATTGGGAACGTAAAAAATAATGAAGTTGGCGGTGGATGGGTACCAATACAAGATCCGATTATGGAGGGCTTGTGCAGAGGCTTGGATGAAAGTTTTGAGGGATGGAGTGGGAGAGTTAAAAAGGCAAGTGTTAATGGGCCTGACTGGGCCAAGGAGGTATTTCTGGCAGAACAAAAACCACCCCTAAAAGATAAAATAAATGCTACTAAAGACTTCAGCACAACTTGGTGTGGGCTGGATAGACTGAGAAATCAGTTGCATTTTGTGTCAAATCCGATCGTCATGGAGGAATCGTCATGTTGCCCAACACATCCTCTTGGTTTTAGTCCAAAAACAGGTAGTATGACAGGGGAAGTATCCATGAGTATTGTAGCTGAAACACCACCGTTTGAACCTTTCATTGGGGCGAAACAAACAACGATTGATGAGGGGGGGTTAGGAGCTGATGAGAATGGGAAAGCTTGTGCAGAGGAAAGCGAGGATGAAATTGAATCCATATTTAGCAGATTGGAAGGCGAGTGTGGAGAGACTAAGGAGCTTTGTGAATCTGGTGGCATAGACTTCGACCATGAACGGGAGGAAAAAATTGCAGAAATATTGGAAACAAGAAAGGAAGAGAGAAGGGCGAAGAAAGCAAAAAGCAAGGGGAGGAACAAAAAGAATTCGGCTGATTATTGA 2181 0.4443 MGNTKWVSEQPCANARVGDGKHWSGKYCYPGLSESELTFPPVRVWDGRQWVAEENHNNRKLRYGDDDRKRSEYGEWTLVSRKKKNPQPAQFQWNSKEQTVARMKTIKGQQDERRAHTVFVDGIEESTSKGLLRYAFGWSGKIVDIYISRKKRKGRKDYFAFIRFEDKGGAVRAIEKMNGAIVNGRRVLVKEASYNRRTNEKRVESREIIQLGEPRQIHQNETGHGGLRAPKSGPKKEEVLNTKTCFLKEVCVEACKDQVEWLQKSLVGEATNPLSYNDLLKRLEGWSGPKIVKCSELGAFKCLITFESKEGLEEAMEMDSFFELLEGCLDNLKPWSSEVWCGSRRVWLEVFGVPVHAWSKDSLSKIGSLWGETVMLDIDTENGKSYSVARILIDTFQRNPICEEICVKCDGIPYRSYVKEFGQDMYGIQCFISQPCENESMKEVAEDGDEEQETDDQGLQTLAPIAPVAGDGEALKNQKHTANDGSLGSAQIVSAPRGGVDIGNVKNNEVGGGWVPIQDPIMEGLCRGLDESFEGWSGRVKKASVNGPDWAKEVFLAEQKPPLKDKINATKDFSTTWCGLDRLRNQLHFVSNPIVMEESSCCPTHPLGFSPKTGSMTGEVSMSIVAETPPFEPFIGAKQTTIDEGGLGADENGKACAEESEDEIESIFSRLEGECGETKELCESGGIDFDHEREEKIAEILETRKEERRAKKAKSKGRNKKNSADY* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1274 726 SUPERFAMILY RNA-binding domain, RBD 109 196 IPR035979 GO:0003676
Aev02g1274 726 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 116 194 IPR000504 GO:0003723
Aev02g1274 726 CDD RRM_SF 118 190 - -
Aev02g1274 726 Pfam Domain of unknown function (DUF4283) 260 393 IPR025558 -
Aev02g1274 726 Gene3D - 77 207 IPR012677 -
Aev02g1274 726 MobiDBLite consensus disorder prediction 701 726 - -
Aev02g1274 726 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 118 187 IPR000504 GO:0003723
Aev02g1274 726 PANTHER RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN 55 221 - -
Aev02g1274 726 SMART rrm1_1 117 190 IPR000504 GO:0003723
Aev02g1274 726 PANTHER FI21236P1 55 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1274 Aev-Chr2 13440125 13446044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1274 107 199 Eukaryotic Initiation Factors Gene Family AT1G34140 36.170 2.14e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1274 - K12891 ahf:112794598 170.244