LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g1168	ATGAAGACGAGGCATATGAATTCTACGATAACTATGCTAAGTAATGTCACACGTGACATAAATGGGGATATCATCACTCGGACTCTTGTTTGCAATAAACATGGCCTTCTAAAGAGGAAGAACCTAGATAGATTGGACATGAAGAGACAACCTAAGGTAAATACTCGAACCAACTGTCGTGCAAAGATTAAGAGAAGGCTAAAGGTGAAAGATGGTGATGCAAATGCTGGCATCAGCTACTTGCGTGGGAAGTCTGGCAGTGACCCATTGATGTGGGTCATGAAAACATATGAAAATAGAAAGATGTGGGCTCAAGCATATCTTCGGGACAAGTTCTTCGGCCGTATTAGGACAACATCTCAGTGTGAAGGAATTAACTCACTAATACGGGCATATATACGAAAGAGAAACACCATAATTGAGTTTATGGTGAACTTTGACTTGGCAATTAGAGGATACATGAACAATGAGTTGCATTCAGATTTCAAGTCCTTCCATGGTGATCCTGTTATTACTAGTGGTTTGCATAAATTCGAGGAATGTGTTGCGAAGACATTCACTAGACAAATATTTTCAGAAGTGAAGCATGAGCTTGAGCAAGTTGTTGCGTTGAATGTTGTTTATTGTTATGAAGATGAAGAACAATTGGTGATGAGGGTGAAAGAATTTTGTTCCCCTAATAGAGAGATCGAGGTGGGTCGTGATAGTGACCATAATAGTATGAAAATGCTTAGGTTTGGTTCATTGGTCGCAACTTGCAATAGTTTGTGCCAACTAGCAAAATCTAGTGTTGATGACTATATTGAAGCACGTGACGAGGTATTCAAACTCATTAGGAACCTTGAGGCTCGGCGTCAGACACGAACCAAACAACAAACTTGTGTCAAAGGTGTTGGCGATCCCATGATAGTTAAGACAAAGGGTGCACCCTTGAAGAAGAAGTTTGGTACGAAAAAGGGCATTAAGCGTTGCTCTAATTGTAATAGAACAGATCACTACTATAGAAGATGTCCACGATCTAGTAAGTTCAATGATGTTGAACAAATGGAAAGTGAACTAAATGAGGACAGGTCATCTGATTCATCATGGCTGAATGAAACGACTCGTAAAGAAAAAAGAATAATGACTGCTACTTATGATGTGGAATCAAAGGGATTAGATCATCACTCCAAAGCTAGTATAAAGAAATCAAAACTCACTGAAGGTGGACCAAACAATGTTGTCAACCTTGGCTATATACCTACTTCTGAATCATACATGATGTCTAACTTGGAGTCATTCCATCAGCCAGCACACATATTCCCCTCTTTCTCCCAACTGCATTGGTACAATCCATTCATTTATCCGCCAATAGGCCAGAATATAAATTGCTTTGGAGGTAGTCATAAAATTATTCTTGGTGGACCAAAATCAGATGCACTTACATATGGACATGTGAATCGAGGTGTTGCACACCCAACAGAACAGTTTAACGGAGCCTTGTATGATGTTGCTCCTAGATATAAAGCATGTAATATTGTTCAAGGTGCATCACAATTAAGCAAAAATCAAGAGCATTGCTAA	1563	0.3935	MKTRHMNSTITMLSNVTRDINGDIITRTLVCNKHGLLKRKNLDRLDMKRQPKVNTRTNCRAKIKRRLKVKDGDANAGISYLRGKSGSDPLMWVMKTYENRKMWAQAYLRDKFFGRIRTTSQCEGINSLIRAYIRKRNTIIEFMVNFDLAIRGYMNNELHSDFKSFHGDPVITSGLHKFEECVAKTFTRQIFSEVKHELEQVVALNVVYCYEDEEQLVMRVKEFCSPNREIEVGRDSDHNSMKMLRFGSLVATCNSLCQLAKSSVDDYIEARDEVFKLIRNLEARRQTRTKQQTCVKGVGDPMIVKTKGAPLKKKFGTKKGIKRCSNCNRTDHYYRRCPRSSKFNDVEQMESELNEDRSSDSSWLNETTRKEKRIMTATYDVESKGLDHHSKASIKKSKLTEGGPNNVVNLGYIPTSESYMMSNLESFHQPAHIFPSFSQLHWYNPFIYPPIGQNINCFGGSHKIILGGPKSDALTYGHVNRGVAHPTEQFNGALYDVAPRYKACNIVQGASQLSKNQEHC*	521

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g1168	520	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	92	224	IPR031052	GO:0006355
	Aev02g1168	520	PANTHER	PROTEIN FAR-RED ELONGATED HYPOCOTYL 3	92	224	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g1168	Aev-Chr2	11900486	11903250	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aev02g1168		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g1168	-		-	ahf:112803750	186.037