Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1158 ATGATGAAGAGACAAAGAAATGAAGAAGCAATAGATACAATAGATTTGGCAAATTGTCTAATGTTTCTTTCTCAATATCCTAAAGAAATTATTAAACCCCAGAAACGTTTTCGCCCTGTGGAATTTGAGTGCACCACTTGCAACCGAAAATTCCCTTCTTTTCAAGCCCTTGGAGGCCATAGGGCCAGCCACAAGAAGCCAAAACAAGAAAAGAAAGAACTTCAAGAACATAGGAAAACTACTCTGAGCCTAGGGAGTAGCAATAATAACAATAGGCCCAAAATGCATGAGTGCTCTATTTGTGGAGAAAAATTCTCTCTGGGACAAGCACTTGGAGGACACATGAGAAGGCACAAACTTGCCAACAATAATTATATTGAAGGGTTTTCTTCTATAAACAATGTTGTTGCAAAAGTTCCTGTTCTGAAGAGATCAAATAGTACAAGGGTGGTTATGTGTTTGGACTTGAACTTGACACCTTTGCAGAATGACATGAAGTTGTTGTTTGGAAACACGGCACCAAAA 525 0.3867 MMKRQRNEEAIDTIDLANCLMFLSQYPKEIIKPQKRFRPVEFECTTCNRKFPSFQALGGHRASHKKPKQEKKELQEHRKTTLSLGSSNNNNRPKMHECSICGEKFSLGQALGGHMRRHKLANNNYIEGFSSINNVVAKVPVLKRSNSTRVVMCLDLNLTPLQNDMKLLFGNTAPK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1158 175 Pfam C2H2-type zinc finger 42 67 - -
Aev02g1158 175 Pfam C2H2-type zinc finger 96 119 - -
Aev02g1158 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Aev02g1158 175 MobiDBLite consensus disorder prediction 56 89 - -
Aev02g1158 175 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 2 175 - -
Aev02g1158 175 SUPERFAMILY beta-beta-alpha zinc fingers 42 118 IPR036236 -
Aev02g1158 175 PANTHER ZINC FINGER PROTEIN ZAT5 2 175 - -
Aev02g1158 175 SMART c2h2final6 42 64 IPR013087 -
Aev02g1158 175 SMART c2h2final6 96 118 IPR013087 -
Aev02g1158 175 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Aev02g1158 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 118 IPR013087 -
Aev02g1158 175 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Aev02g1158 175 Gene3D Classic Zinc Finger 40 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1158 Aev-Chr2 11785907 11786431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1158 2 175 C2H2 Transcription Factor Family AT2G37430 46.448 8.85e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g1158 zf-C2H2_6 1.4e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1158 - - aprc:113870747 216.083