Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1152 ATGGCCATCATCAAGAGACAAAGAGAAAACGAAGAAACAGATCAGACCATAGATTTGGCAAATAGTCTCATGCTTCTCTCTAGTGCCATACAAAGTAGTACCAAACCTCCTCACAAAACTTACCCTCCTCCTGCTCAATTCGAGTGCAAAACTTGTAACCGCAAATTCTCATCGTTTCAAGCACTTGGTGGGCACAGGGCAAGCCACAAGAGACCAAAACATGATGAAAGGGAAGAACACATCAAATCAGAGGCCAATAAATGGACCAAACCCAAAATGCACGAGTGCTCAATTTGTGGCATAGAGTTCTCTTTGGGACAAGCATTGGGAGGGCACATGAGGAAGCATAGAGTAGCTGCTATTACCAATATTGATGGAGAAGGGTTTTCTTCTTCTATATGCCAAGATATAATAATTAAAGCAGCACCGGTTCTGAAAAGGTCAAATAGTAGTAAGAGGGTTATTATGGGCATGGACTTGAATTTGACACCGCTGGAAAATGATTTGAAGTTGTTGTTTGGAAACAGGGCACCTCAAGTTGATCTTTCTCTGTTCTGA 558 0.4194 MAIIKRQRENEETDQTIDLANSLMLLSSAIQSSTKPPHKTYPPPAQFECKTCNRKFSSFQALGGHRASHKRPKHDEREEHIKSEANKWTKPKMHECSICGIEFSLGQALGGHMRKHRVAAITNIDGEGFSSSICQDIIIKAAPVLKRSNSSKRVIMGMDLNLTPLENDLKLLFGNRAPQVDLSLF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1152 185 Pfam C2H2-type zinc finger 94 117 - -
Aev02g1152 185 Pfam C2H2-type zinc finger 47 72 - -
Aev02g1152 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Aev02g1152 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 116 IPR013087 -
Aev02g1152 185 PANTHER ZINC FINGER PROTEIN ZAT5 4 179 - -
Aev02g1152 185 SUPERFAMILY beta-beta-alpha zinc fingers 47 116 IPR036236 -
Aev02g1152 185 SMART c2h2final6 47 69 IPR013087 -
Aev02g1152 185 SMART c2h2final6 94 116 IPR013087 -
Aev02g1152 185 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Aev02g1152 185 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Aev02g1152 185 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 4 179 - -
Aev02g1152 185 Gene3D Classic Zinc Finger 44 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1152 Aev-Chr2 11690471 11691028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1152 4 184 C2H2 Transcription Factor Family AT2G37430 45.946 5.52e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g1152 zf-C2H2_6 2e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1152 - - gmx:100778467 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0187 06 1465553 1466152 Aev02g1152 02 11690471 11691028 PCT