Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1122 ATGGGAGAAGAAGTAGTTTGCATGCAAGCATTGACAGATGGAAACAAGGAGAACAATGAGGATTCAAGGACTGAACTTAAGCGTGATTACCACCAATGCGTTGTTTCTGATGCAATCATTGAACCTTACCATTCTCCAAATAAGAAACAGGCTAAGGAAGTTTCCAATGACGAATTGCGCTCTGAAGTTACCAATCCGAACACTTCCGTAACAGAGAATGCATTAGCTTTTCAAGATATCAGTGGCCAACCAACTGAATCGACGAATGCAAACCACACAGAGTGTGGGGAACTAACTTCCACATGTTTGGAGAATTCAAGCTTTGATGAGACCTTAAGTTATGAAACTGGTGATCAGAACAATGACAATGATATTCGAAATGATAAGGGCACAAATAGCTCTGAGGTAACAAAGTCATGTGTTGTGCTGGAAATCCCCAAGCATGCTAGTTCATCTGGGATTAGAAAGATAACTTTTAAGTTCAGTAAGAAGAAGGAGGACTATAATTACCAATCACATGCTCGTGTTGCTTATGGCAATAATCCCTACGGTTTTCAAGGCAATGATGAAGAATATTTGGCAATGGCAAGGGCTGATTATCATGGTGGTTCGTTGGAAAGCCCAAGTGGAATGGGATACTCTGGAAATGGCGAGATGGACTTGTACACTCGCAATATGGAATTGAAGATGTCCAAGAAGGTAGTCCCCAGCTGCTACCCTACAAATGTCAAGAAGTTGTTATCAACTGGTATCCTTGATGGAGCTGCAGTTAAGTATATTTACAACCCAGGAAAGGTTGAGTTACCGGGGATGATTGATGGTGGAGGATATTTGTGTGGTTGTTCAACGTGTAATTACTCAAGAGTGCTTAGTGCCTATGAGTTTGAGCAACATGCTGGTGCCAAGACTAGACATCCAAATAATCATATATACTTGGAGAATGGAAGACCGATATATAGTATTATACAAGAAATAAAAACTGCTCCGCTCAGCATACTAGATGAGGTTATAAAGAATATGGCTGGCTCGTCTGTCAACGAGGAGTCCTTCCTGGTTTGGAAAGAAAGTCTTCTACAAAGCAATGGGAGGGTTCAGGGTCACAAAAATTATGGCACCAAGCATACTGGCACTTCTCATAAAAAGATAAGTCAATCTGCCGAAAGTTTGAGCCACTTGCCTACTATGCATGTGCCAAGTCATTGTGAGCATCAAATGGCTGTGAAGCAGACAATTGATGAGGGGAAGCATGTAGTGAAAAGAAGAGCTGATGGTTGCACCAAGAGAAGGGACAACGATTTACACAGGTTACTTTTTATGCCAAATGGACTACCAGATGGAGCTGAATTGGCTTACTATGTTAAAGGACAGAAATTACTTGGAGGTTACAAACAGGGAAATGGTATAGTCTGTGGTTGTTGTGATATAGAGATAAGTCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGACGTCAACCATACCGACACATATATACTTCAAATGGATTAACACTTCATGATATAGCTCTCTCTCTGGCAAATGGTCAGAACCTTACCACTGGAGATAGTGATGATATGTGTGCTGTATGTGGAGACGGTGGAGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATGCAGCCTGCTTGGGTTTACAATGTGTTCCAGAAAGTAGTTGGCTTTGTCTGAATTGTAGAGATAATGCTGGTAATGGAAGAGAATCTTCTTTGGTGAGGCCAATTATGATACGGTTGACACGGGTTGATAAAGCACCAGAGTTTGAAATGGGAGGATGTGTTGTTTGCAGGGAAAATGATTTCAGTGTTGCTAAGTTTGATGAGCGAACAGTAATTATTTGTGACCAGTGTGAGAAGGAATATCATGTTGGTTGCTTGCGGGACATTGGGCTATGTGAGTTGGAAGAGCTGCCCAAAGATAAGTGGTTTTGTTGTGGTGACTGCAATCGAATATATGTGGCTCTACAGAATTCAGTTTCTGCTGGAGCTGACATTATACCAGCTTCCTTGTCAGAACTAATAATTAGGAAGCATGAGCAGAAGGGATTATGTACCAATGGCGCCATGAATGATATCAAGTGGAGAATTTTAAGTGGAAAAAGTCGTTATCCAGAGCACTTACCGTTACTTTCTCGGGCAGCAGCAATTTTTCGATCATATAAGGGCTTTTTGCATCCTTCTGTTTTCCGCAAATAA 2220 0.4153 MGEEVVCMQALTDGNKENNEDSRTELKRDYHQCVVSDAIIEPYHSPNKKQAKEVSNDELRSEVTNPNTSVTENALAFQDISGQPTESTNANHTECGELTSTCLENSSFDETLSYETGDQNNDNDIRNDKGTNSSEVTKSCVVLEIPKHASSSGIRKITFKFSKKKEDYNYQSHARVAYGNNPYGFQGNDEEYLAMARADYHGGSLESPSGMGYSGNGEMDLYTRNMELKMSKKVVPSCYPTNVKKLLSTGILDGAAVKYIYNPGKVELPGMIDGGGYLCGCSTCNYSRVLSAYEFEQHAGAKTRHPNNHIYLENGRPIYSIIQEIKTAPLSILDEVIKNMAGSSVNEESFLVWKESLLQSNGRVQGHKNYGTKHTGTSHKKISQSAESLSHLPTMHVPSHCEHQMAVKQTIDEGKHVVKRRADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAACLGLQCVPESSWLCLNCRDNAGNGRESSLVRPIMIRLTRVDKAPEFEMGGCVVCRENDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCGDCNRIYVALQNSVSAGADIIPASLSELIIRKHEQKGLCTNGAMNDIKWRILSGKSRYPEHLPLLSRAAAIFRSYKGFLHPSVFRK* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1122 739 Pfam Tify domain binding domain 461 510 IPR032308 -
Aev02g1122 739 Pfam Tify domain binding domain 270 324 IPR032308 -
Aev02g1122 739 ProSiteProfiles Zinc finger PHD-type profile. 525 570 IPR019787 -
Aev02g1122 739 MobiDBLite consensus disorder prediction 112 133 - -
Aev02g1122 739 SUPERFAMILY FYVE/PHD zinc finger 523 570 IPR011011 -
Aev02g1122 739 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 515 595 IPR013083 -
Aev02g1122 739 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 597 659 IPR013083 -
Aev02g1122 739 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 2 727 - -
Aev02g1122 739 Pfam PHD-finger 527 568 IPR019787 -
Aev02g1122 739 PANTHER AUTOIMMUNE REGULATOR 2 727 - -
Aev02g1122 739 ProSitePatterns Zinc finger PHD-type signature. 601 656 IPR019786 -
Aev02g1122 739 SUPERFAMILY FYVE/PHD zinc finger 599 653 IPR011011 -
Aev02g1122 739 SMART PHD_3 527 568 IPR001965 -
Aev02g1122 739 SMART PHD_3 600 657 IPR001965 -
Aev02g1122 739 CDD PHD1_AIRE 527 567 - -
Aev02g1122 739 ProSitePatterns Zinc finger PHD-type signature. 528 567 IPR019786 -
Aev02g1122 739 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1122 Aev-Chr2 11229376 11239907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1122 1 726 PHD Transcription Factor Family AT3G53680 47.487 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev02g1122 TDBD 4.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1122 - - gmx:100808999 1202.19