Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1088 ATGCTATTGTGTGTATATTCTCCTGTTCAGATCTGGGCCGGATTCGGTCGTGGTATTCACAGAGTGTGGTGTGAATTTATTGTCCCCTGTTTGAGTTTTTGGCTGCGAAGAGGAACGCCAGATCTGGTTCGTCTGTGGCTTGGTTCTGGAGTTTCTGCCATGGCTGAGACCTTTAATTTCTTTCTTGATATGGTTGTTATTGGTGTGTATAGACGCCGAATCACCCCAGTAGGTATTTTTGTAGCCTATCTTTATTGTCTTTTCCCTGTTGACCCCGGGCAGGAAAATGTTACTGACCAAGGTTATTTGGATGAGCAACTGAATAACGGTTATTTGGGTGAGAAATTGAATAGCAATGACATGGGTGATGAAAGTATTTATGAGGATTGGGATGATGGTATTGAGGAAGAAGACGAACAGCCCAATAGTACTGGTGAGGATGAGAATTGCGACGAAGTTGCCGAAGATGGTGGATATGATGATGGAGGTAACGATGGTAGCAATGGTCTTCCAAATCCTGAATTTCAGATTGACTCTCTAGAAGAAATTGGCGGATTTGAGTTAGGGAATTTAGGAGACAATTTGGTTGAAAAATTTCACTTTAGTGATCTTGCTGTAGCTTATGAATTCTACAATAGGCTGGGAAAAAGTAGAGGGTTTGGTGTAAGGAAATACAGAACAAGGACCAATGCAAGGGGTGTTCGTGTGATACAAACATTTGTTTGCTCTTGTGAGGGTTATAGACCAATGAAATTTTACAATATTTCAAATCGAAAGAAGGAGCCTAGAGCGGAGAGACGATGTGGCTGCATGGCTAGAATGAAGGTTCGATTAGATATACCTAGTGGGAGATGGCTGATGACAGAGTTCTGTGACGAACATAATCATGCTTGTCTTGCACCTAGGTTCTATGGCATGTTGGCAACACACAAAAGAATGAATGATGGAGATGTAATGCAAATGAACACTATGAGGCGTGGTGGTATTAGTACGTCCCACATCTATGGCTCCATTGCTACTCAATCAGGCGGACACCAATATGTTGGGTATGGACTACGGGACATGTACAACCAAATAGCAAAAGAAAGGCGTCAATTGGCTGGTGATGCCAATTCTGCATTGCAGTATCTAAAGGAAAGAGCTGTAAAGGACAACATGTTTTATTTCCAACACTCTGTTAACTGTAATGGTAGTATGCGGAATTTATTCTGGTGTGATGGTATTAGTATAAGAGATTATAGGGCATTTGGCGATGTCTTGGCCTTTGATGCCACGCACAAGAAGAATCGGAAAGTGTTTCCTACGGCGCATCACAGGTTATGTGCTTGGCACCTTATTCGCAATGCAGCCAGCAATGTTGGAAACCCTCAGTTCATATCCAAATTCAAGATGTGCATGCTTGGTGATTTAGAAATTCCTGTGTTTCGTAGGAAATGGTTCGAGAAGGTTGAAGAATTTGGGTTAGAAGACAATAGATTGGTAAATGAGATGTTTGCATGCGGTTATATCAAAGTACGTGAGGCTCGAGCAGATTTTTATAGTGTGGATGGTTTTCCGGTAATGGTTTCTGATCTCGAACCACTTGAGAGGTTTGCTGCGGAGGTGTACACTCGAGACATATTTTTCCTATTTCGTCCATATCTATCTAGAGTTGCGACATTGCGAATAGCTGAAGAAAGGGTCACCGGGTCTTGTGTCATATATGTCATCGGGAAGTATGGGAAACCGAATTCCGTGTGGCACGTGTGTTATTCTGAAGAACCCATGGAGTTCAAGTGCTCGTGTCAACGTCTAGAGTCATTGGGGATCCCGTGTGAACACATACTTGCAGTGCTCGTGCGGCTTGACATCGTTGATTTGCCGAATTGTTTAATTCTTCGTAGGTGGACAAAGGATGCAAAGCCACCTCCCGAAGATGAGAACGGGGAAAATTTTTATTTTGTCAAAGCTGCCCGTTACAATTCATTAATGATTGGTTATCATGAATTGTCCATGATAGCATGTGGTAAAGCAGAGAGGTATGCTGCGAAGAGGAGTCAATGCTATGATGACATTGCAACTTTGAAGTTAGAGGATGCTGAAGAAGCCAATATGAGAAATGAATCAAATCCTGAAGGAGGAGAACACACATCTGAAGCAGTTGATGTTCCTATGAATCCCGTTAAGTGCAGGACGAAGGGGCGATCTTCGGGTAATAGTGCGAAGTCATCACAACGACGTGGCATTTGTCGAATGGAAGGACGTAACAGGAAGACTTGTACTGTACAACTAGACATTTATAGTCATCGCAATGCTGCTAGTGGTGGGACAAGCGACTATGATAGCGAACCGGATGAGGAGTGGTCAGATTTGCAACCTGCTAGTCATGTGGTAATTTTTGTGTCTTTCTTTGTGCTCAAACTTTTACTGCATATATGTGTTATAGGTTTGTGCTAA 2436 0.4265 MLLCVYSPVQIWAGFGRGIHRVWCEFIVPCLSFWLRRGTPDLVRLWLGSGVSAMAETFNFFLDMVVIGVYRRRITPVGIFVAYLYCLFPVDPGQENVTDQGYLDEQLNNGYLGEKLNSNDMGDESIYEDWDDGIEEEDEQPNSTGEDENCDEVAEDGGYDDGGNDGSNGLPNPEFQIDSLEEIGGFELGNLGDNLVEKFHFSDLAVAYEFYNRLGKSRGFGVRKYRTRTNARGVRVIQTFVCSCEGYRPMKFYNISNRKKEPRAERRCGCMARMKVRLDIPSGRWLMTEFCDEHNHACLAPRFYGMLATHKRMNDGDVMQMNTMRRGGISTSHIYGSIATQSGGHQYVGYGLRDMYNQIAKERRQLAGDANSALQYLKERAVKDNMFYFQHSVNCNGSMRNLFWCDGISIRDYRAFGDVLAFDATHKKNRKVFPTAHHRLCAWHLIRNAASNVGNPQFISKFKMCMLGDLEIPVFRRKWFEKVEEFGLEDNRLVNEMFACGYIKVREARADFYSVDGFPVMVSDLEPLERFAAEVYTRDIFFLFRPYLSRVATLRIAEERVTGSCVIYVIGKYGKPNSVWHVCYSEEPMEFKCSCQRLESLGIPCEHILAVLVRLDIVDLPNCLILRRWTKDAKPPPEDENGENFYFVKAARYNSLMIGYHELSMIACGKAERYAAKRSQCYDDIATLKLEDAEEANMRNESNPEGGEHTSEAVDVPMNPVKCRTKGRSSGNSAKSSQRRGICRMEGRNRKTCTVQLDIYSHRNAASGGTSDYDSEPDEEWSDLQPASHVVIFVSFFVLKLLLHICVIGLC* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1088 811 SMART 26again6 591 618 IPR006564 GO:0008270
Aev02g1088 811 ProSiteProfiles Zinc finger SWIM-type profile. 580 616 IPR007527 GO:0008270
Aev02g1088 811 MobiDBLite consensus disorder prediction 693 741 - -
Aev02g1088 811 MobiDBLite consensus disorder prediction 135 159 - -
Aev02g1088 811 MobiDBLite consensus disorder prediction 135 174 - -
Aev02g1088 811 MobiDBLite consensus disorder prediction 693 708 - -
Aev02g1088 811 Pfam FAR1 DNA-binding domain 209 299 IPR004330 -
Aev02g1088 811 PANTHER OS03G0181600 PROTEIN 200 429 - -
Aev02g1088 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 429 IPR031052 GO:0006355
Aev02g1088 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 507 686 IPR031052 GO:0006355
Aev02g1088 811 Pfam SWIM zinc finger 592 613 IPR007527 GO:0008270
Aev02g1088 811 MobiDBLite consensus disorder prediction 725 739 - -
Aev02g1088 811 PANTHER OS03G0181600 PROTEIN 507 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1088 Aev-Chr2 10613039 10617896 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev02g1088 FAR1 2.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1088 - - ahf:112720852 423.705