Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1038 ATGGCAGCAGCAGCACGCCCCCTCGTCACCATTCAACCCTTGGAAGGCGACATGGCCACCGACATCGCACCAACTGTCCCCTTACCCGACGTCATGAAGGCCGCCATCCGCCCCGACATCGTCACCTTCGTCCACGACAACATCTCCAAGAACTCCCGCCAACCCTACGCCGTCAGCCGCCGCGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGAACCGGCCGTGCTGTGTCCCGTATACCCCGTGTCCCCGGAGGCGGAACCCACCGCGCCGGTCAGGGAGCCTTCGGAAACATGTGCCGTGGTGGACGCATGTTCGCCCCAACCAAGATCTGGCGCCGATGGCACCGTAAGATCAATGTGAATCAGAAGCGCTACGCCGTCGTCTCTGCCATCGCCGCCTCCGCAATCCCCTCCCTCGTGGTGGCCCGCGGCCATCGCATCGACTCCGTTCCTGAACTCCCCCTCGTCGTCAGTGATTCCGCCGAGGGAGTCGAGAAGACGAAGGAGGCGATCAAGGTCCTCAAAAACGTTGGTGCTTACGCTGACGCTGAGAAGGCCAAAGACAGCCACGGAATTCGCCCTGGTAAGGGGAAAATGCGGAATCGTCGTTATATTTCCCGAAAGGGACCATTAATCGTTTACGGAACTGAAGGTGCTAAGGCCGTTAAGGCCTTCAGGAACATACCTGGAGTTGAAGTTGCCAACGTTGAGAGGCTCAATTTGCTTAAGCTTGCTCCTGGTGGTCACCTTGGGAGGTTCGTGGTTTGGACCAAATCGGCTTTTGAGAAACTTGATTCGATTTATGGGTCTTTTGATAAGGCTTCGGAGGAGAAGAAGGGTTATTTGTTGCCTAGGTCGAAGATGGTCAATGCGGATTTGTCTAGGATTATTAACTCTGATGAGGTTCAGTCTGTTGTTAGGCCTATTAAAATGGAGGTTAAGAGGGCACAAATGAAGAAGAACCCACTCAAGAATCTCAATGTGATGTTGAAGCTGAATCCTTATGCTAAGACTGCTAGGAGGATGGCTTTGCTTGCTGAGGCAGAGCGTGTTAAGGCTAAGAAGGAGAAGCTTGACAAGAAGAGGAAGACAACTGTCTCCAAGGAGGAAGTTTCTGCAATCAGGGCTGCAGGAAAGGCATGGTATCAAACTATGGTGTCCGACTCTGATTACACAGAATTTGATAACTTCTCTAAGTGGTTGGGTGTTTCACAGTGA 1221 0.5381 MAAAARPLVTIQPLEGDMATDIAPTVPLPDVMKAAIRPDIVTFVHDNISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSLVVARGHRIDSVPELPLVVSDSAEGVEKTKEAIKVLKNVGAYADAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKASEEKKGYLLPRSKMVNADLSRIINSDEVQSVVRPIKMEVKRAQMKKNPLKNLNVMLKLNPYAKTARRMALLAEAERVKAKKEKLDKKRKTTVSKEEVSAIRAAGKAWYQTMVSDSDYTEFDNFSKWLGVSQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1038 406 MobiDBLite consensus disorder prediction 55 95 - -
Aev02g1038 406 Gene3D - 3 308 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aev02g1038 406 PANTHER BNAC03G35890D PROTEIN 2 406 - -
Aev02g1038 406 MobiDBLite consensus disorder prediction 55 73 - -
Aev02g1038 406 Pfam Ribosomal protein L4/L1 family 26 266 IPR002136 GO:0003735|GO:0005840|GO:0006412
Aev02g1038 406 SUPERFAMILY Ribosomal protein L4 21 267 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aev02g1038 406 Pfam 60S ribosomal protein L4 C-terminal domain 280 352 IPR025755 -
Aev02g1038 406 PANTHER 60S RIBOSOMAL PROTEIN L4 2 406 IPR045240 -
Aev02g1038 406 Coils Coil 342 362 - -
Aev02g1038 406 ProSitePatterns Ribosomal protein L1e signature. 120 146 IPR013000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1038 Aev-Chr2 9889447 9891712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1038 2 406 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 80.494 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1038 K02930 - gmx:100779764 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0222 06 1670894 1672652 Aev02g1038 02 9889447 9891712 PCT