Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1027 ATGTGGCATGAGAATTCTTCTTCTGGATCATTTTCTGTTTCTGAATCTGAATCTGCTGCTCTTTCTTACCCATTTCTGAGATTTGAGACTTATTCTATTTTTAATTATTATTTTTTTAATCTGTTTGTTTCAGATGGAATGGCAGATCCAGCTAGTCATGGGAATCATGAGCGTGATATTGAGCAAGCATTCCTTGCTTTAAAAAGGGGCACTCAGTTAGTAAAGTATAGCCGGAAAGGGAAGCCAAAGTTTTGTCCATTCAGGCTCTCGACGGATGAAACAACATTAATTTGGATTTCTCATGGAAGGGAAAAGAATCTAAAATTGTCTTCTGTTTTGCGCATCACCCCTGGACAGAGAACAGCTGTCTTCAGAAGATATTTGCGTCCTGAAAAGGATTATTTGTCATTTTCACTTATTTATAAAAAAGGGGAGCGGTCACTTGATCTGATTTGCAAGGACAAAGCTGAGGTAGAGGTATGGTTTGAAGGCCTTAAGGCATTAATTTCTACTGGACAGTATAGTAGGCGCACTAGAAGTGAGTCACCAGATGATAGTGTTGACTCTTGTCAGAACGATCGTCCTTTTGGTGGAGCACTAGATTATACTTCAAGCATTGTCCGGAGCAAATTTAGTTTTGATTCACTTTCTCGTGAGTTTCCATTGAATTCAGCAAGCTCAGATGCGGGGTCAGAATATGCAAGTATGCCAGTAAGGACAAGTGTTGGAGATGGTTCCCGTATTAGTGTGTCAAGTGCTGGTTACGCAAGTAGTGTAGCATCAGGACCGGATGACATAGAGTCTCTTGGTGATGTTTTTATTTGGGGAGAGGTTTGTGCTGATGGAACCTTACCTAATGGCTTGGGGAGTCAAGTCCATTCAAAGATAGATGTACTAACTCCTAAGCCATTAGAGTCTGATGTTGTTCTAGATGTTAATCAGATTGGGTGTGGTGTACATCACATTTCTCTAGTTACACGGCAAGGAGAGGTTTTTACTTGGGGAGAGGGCTATGGTGGAATACTTGGTCATGGGTTTGAAAAAGACTGTGGTAAACCCCGGCTTGTGGAGTCCCTGGCGGTTACCAATGTAGGTTTTGTTGCATGTGGTGAAAATCATACATGTGCTTTGTCTACATCCGGCGAACTATTCTCCTGGGGTGATGGCACACATAATGCTGGACTACTTGGGCATGGTACTGATGTTAGCCATTGGATACCAAAGAGGGTCTGTGGCTCTTTAGAGGGACTTCATGTTGTATCTGTGGCATGTGGTGCATGGCATTCAGCATTGGCAACGGCCAACGGAAAACTGTTTACCTTTGGTGATGGAAAATTCGGTGTCCTTGGCCATGGAGATCGAGAGAGTGTAGCATATCCAAAGGAAGTACAACTATTGAGTGGACAAAAGGCAGTTAAGGTAGCATGTGGAATATGGCACACAGCAGCTATCATAGAGGTTTTGGATCAGTCTGTTTCAAATGCTTCATCCAGGAGGCTTTTCACTTGGGGTGATGGCGACCAATATCGTTTGGGTCATGGTAATAAGGACACCTACCTTCAACCAACTTGTGTACATCCACTTGCTGAATATAGTTTTCACCAGATAGCATGTGGGCACACCATGACTGTTGCACTCACTGTATCTGGTCATGTCTTTACTATGGGAGGAACTACATATGGTCAACTAGGAAGTCCAGTGTCAGATGGAAAAGCACCAACTCTGGTCCGAGATAAGTTAGTAGGTGAGTATGTGGAGGAAATATCATGTGGAGCACATCATGTTGCTCTATTGACTTCAAGAAGTGAACTTTACACTTGGGGGAGAGGTGCCAATGGAAGATTGGGACACGGAGACACAGATGACAAAAATTCACCAACACTGGTTGAAGCCTTCAAAGAGAGGCTTGTAAAGAATATCTCATGTGGCTCGAACTTTACATGTTGTATATGCATACATAAGTGGATCTCTGGAGCTGACCAATCTGTTTGCTCCGGTTGTCGACAACCATTTGGTTTTACTAGGAAAAGGCACAATTGTTACAATTGTGGGTTGGTCTATTGCCATCCCTGTAGTTCCAAAAAGGCACCAAAAGCAGCGTTGGCTCCAACACCCAGCAAACCACATCGTGTATGTGAAGCTTGTTTTGCTAAGCTTAAAGTTCCTGAGGTCGGTAGTGCTTCCACTTTTAATAGAGACATGACTCGTCCTTATAGTTCCATATACAGAAAGGAAAGATCTGATAGAGAGGTAAAGAGTGCAAGAATTCTCTTATATCCCACTGCAGAACCATTAAAGTACCTAGAGTTAATGACATCTAAGCCTGGAATTACACATGAATCTTCCATAGCCCGAGTTACGCAACCAATTCCTGTTACACAACCAAATCAACCTGCCACTCCACCTGCACAAGCTATTTCTAGACCTGCATCGCCGTATGCAAGACGACCAAGCCCACCACGTTCTACCTCCCCTGGATTTTCAAGAAGCCTTATTGACAGTTTAAGGAAGAGAAATGAACTTTTGAATCAAGAAGTCTCAAAATTGCAAAACAAAATTCGAAGTATTAAGCAGAAAAGTGACATGCAAGATATGAAGATTCAGGAACTTAAGAAATATGTTCAGGAAGCCACCTCATTGGCTGGAGAAGAATCATCTAAGCATAGAGTAGTAAAGGAATTTCTTAAGTCCATCACAGATCAGTTGAGGGAAGTGAGTGAGAAGTTGCCACCTGAGATTCCTGACAGTCAGACCTTAAGGACCATGCATACTAATGCTGAAGATTTTCTTAAAGACATAGAATTTGAATCTTCTTCCTTCCAATCAAGCTTTGAGCCTGAGCAAAAAAGCGCACCTGATACAGATCACTTAGATAGTGGCTCTTCTAAAATGCCAAAACAAGGAGTGGAAGAAAATGTTGACGCTGCCAGAGCTGATCCATCTACTAATGGAGAAAATGTTCTTCAAGACGGAAATGGACCATCTGTATCTAGTACAGGAGTGCCTCTGCCAAACTCAGAAAATAGCTCAAGATCTTCTAATGCTGGGAGGGATGAAGTCACAGCCATTGAACAATTTGAACGTGGTGTTTATGTTACGGTTATAGTTCTACCTTCTGGTAGCAAACTTTTCAAGCGTGTAAGATTCAGTAAGCGCAGATTCGATGAGCAACAGGCAGAAGTATGGTGGAACCAAAACAAAGATAGGGTGTTTAGGAAATATAGTCCAACAGCTAGTGGTTCATCTATCACCACACCAAATGCTGAAGAGAGTATCGAGGCATCATCTTCTTCCTAA 3297 0.4234 MWHENSSSGSFSVSESESAALSYPFLRFETYSIFNYYFFNLFVSDGMADPASHGNHERDIEQAFLALKRGTQLVKYSRKGKPKFCPFRLSTDETTLIWISHGREKNLKLSSVLRITPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKDKAEVEVWFEGLKALISTGQYSRRTRSESPDDSVDSCQNDRPFGGALDYTSSIVRSKFSFDSLSREFPLNSASSDAGSEYASMPVRTSVGDGSRISVSSAGYASSVASGPDDIESLGDVFIWGEVCADGTLPNGLGSQVHSKIDVLTPKPLESDVVLDVNQIGCGVHHISLVTRQGEVFTWGEGYGGILGHGFEKDCGKPRLVESLAVTNVGFVACGENHTCALSTSGELFSWGDGTHNAGLLGHGTDVSHWIPKRVCGSLEGLHVVSVACGAWHSALATANGKLFTFGDGKFGVLGHGDRESVAYPKEVQLLSGQKAVKVACGIWHTAAIIEVLDQSVSNASSRRLFTWGDGDQYRLGHGNKDTYLQPTCVHPLAEYSFHQIACGHTMTVALTVSGHVFTMGGTTYGQLGSPVSDGKAPTLVRDKLVGEYVEEISCGAHHVALLTSRSELYTWGRGANGRLGHGDTDDKNSPTLVEAFKERLVKNISCGSNFTCCICIHKWISGADQSVCSGCRQPFGFTRKRHNCYNCGLVYCHPCSSKKAPKAALAPTPSKPHRVCEACFAKLKVPEVGSASTFNRDMTRPYSSIYRKERSDREVKSARILLYPTAEPLKYLELMTSKPGITHESSIARVTQPIPVTQPNQPATPPAQAISRPASPYARRPSPPRSTSPGFSRSLIDSLRKRNELLNQEVSKLQNKIRSIKQKSDMQDMKIQELKKYVQEATSLAGEESSKHRVVKEFLKSITDQLREVSEKLPPEIPDSQTLRTMHTNAEDFLKDIEFESSSFQSSFEPEQKSAPDTDHLDSGSSKMPKQGVEENVDAARADPSTNGENVLQDGNGPSVSSTGVPLPNSENSSRSSNAGRDEVTAIEQFERGVYVTVIVLPSGSKLFKRVRFSKRRFDEQQAEVWWNQNKDRVFRKYSPTASGSSITTPNAEESIEASSSS* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1027 1098 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 791 1081 - -
Aev02g1027 1098 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 59 788 - -
Aev02g1027 1098 MobiDBLite consensus disorder prediction 940 1017 - -
Aev02g1027 1098 Pfam Transcription factor regulating root and shoot growth via Pin3 1022 1074 IPR013591 -
Aev02g1027 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 498 549 IPR000408 -
Aev02g1027 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 602 653 IPR000408 -
Aev02g1027 1098 SMART fyve_4 652 721 IPR000306 GO:0046872
Aev02g1027 1098 PRINTS Chromosome condensation regulator RCC1 signature 539 557 IPR000408 -
Aev02g1027 1098 PRINTS Chromosome condensation regulator RCC1 signature 422 438 IPR000408 -
Aev02g1027 1098 PRINTS Chromosome condensation regulator RCC1 signature 381 397 IPR000408 -
Aev02g1027 1098 PRINTS Chromosome condensation regulator RCC1 signature 597 618 IPR000408 -
Aev02g1027 1098 PRINTS Chromosome condensation regulator RCC1 signature 331 347 IPR000408 -
Aev02g1027 1098 PRINTS Chromosome condensation regulator RCC1 signature 438 452 IPR000408 -
Aev02g1027 1098 MobiDBLite consensus disorder prediction 791 829 - -
Aev02g1027 1098 Gene3D - 221 490 IPR009091 -
Aev02g1027 1098 PANTHER CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN 59 788 - -
Aev02g1027 1098 Pfam Transcription factor BRX N-terminal domain 883 917 IPR027988 -
Aev02g1027 1098 Pfam FYVE zinc finger 654 719 IPR000306 GO:0046872
Aev02g1027 1098 MobiDBLite consensus disorder prediction 982 1017 - -
Aev02g1027 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 381 435 IPR000408 -
Aev02g1027 1098 CDD PH_PLC_plant-like 58 170 - -
Aev02g1027 1098 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 474 484 IPR000408 -
Aev02g1027 1098 Gene3D - 59 178 IPR011993 -
Aev02g1027 1098 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 659 728 IPR013083 -
Aev02g1027 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 329 380 IPR000408 -
Aev02g1027 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 550 601 IPR000408 -
Aev02g1027 1098 Pfam Pleckstrin homology domain 61 169 IPR001849 -
Aev02g1027 1098 SUPERFAMILY RCC1/BLIP-II 269 655 IPR009091 -
Aev02g1027 1098 PANTHER CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN 791 1081 - -
Aev02g1027 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 436 487 IPR000408 -
Aev02g1027 1098 SUPERFAMILY PH domain-like 59 169 - -
Aev02g1027 1098 ProSiteProfiles BRX domain profile. 1020 1075 IPR013591 -
Aev02g1027 1098 Gene3D - 491 658 IPR009091 -
Aev02g1027 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 603 650 IPR000408 -
Aev02g1027 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 499 546 IPR000408 -
Aev02g1027 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 329 377 IPR000408 -
Aev02g1027 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 380 431 IPR000408 -
Aev02g1027 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 435 484 IPR000408 -
Aev02g1027 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 549 598 IPR000408 -
Aev02g1027 1098 Coils Coil 832 859 - -
Aev02g1027 1098 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 658 720 IPR017455 -
Aev02g1027 1098 MobiDBLite consensus disorder prediction 1075 1098 - -
Aev02g1027 1098 SUPERFAMILY FYVE/PHD zinc finger 654 720 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1027 Aev-Chr2 9755781 9766822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1027 1023 1075 Major Intrinsic Protein MIP AT1G31880 41.509 1.75e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1027 - - gmx:100778984 1422.53