Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0997 ATGGGTAACTCTCACGGCCATCACAAACACCGTAACTCCTTACCTCACAACACGCCCACTTCTTCACCCTATAAATATGGTACTCAGAAAGAACCCAATAATCCATTCCAAACACAACTGACACAAGGTAACTCCAATAATAACAACAACAACAATATGATCTCTTTGTTGCCTTACGCGCACGTCGACTCCACGCTCCGAGCACTCGCTGGCCAGGCTGAGGGATTTGGTCGCTTCGCCGTTGGTGGTTTACATGGTCCCCTTTATCATGTCATGAATCTCGCAGATGATGGACCAGGATCGCTGCGTGACGCATGTCGCAGAAAAGAGCCTTTGTGGATTGTATTTGAGGTTTCAGGCACCATTCATCTGTCATCATATTTGAGTGTATCATCTTACAAGACCATTGATGGCAGGGGACAAAGGATCAAACTAACTGGAAAAGGACTGCGACTGAAGGAATGTGAGCACGTAATCATTTGCAATTTGGAGTTTGAAGGTGGCAGAGGACCTGATGTTGATGCCATTCAGATCAAGCCTAATTCAAAGCACATATGGATTGATCGTTGCAGTCTTAGTGACTTTGATGATGGACTGATAGATATAACTCAAGGAAGCACAGATATTACGATTTCAAGGTGTCACTTTTCCAAGCATGACAAAACAATTCTCATTGGAGCCGATCCCTCGCATGTTGGGGATAGATGCATGAAGGTAACCATTCACCATTGCTTTTTCGATGAGACTCGACAGAGGCATCCTCGTGTTAGATTTGCGAAAGTGCATCTTTACAATAACTACACCAGAAACTGGGGCATATATGCTGTTTGTGCAAGTGTGGAATCCCAGATATTCTCACAACATAATATTTATGAAGCTGGTCAGAAGAAGATGGCATTTAAATATATTTCTGAGAAGGCAACAAATAGGGGAATGGAAGTAACTGGCCATGTAAGGTCTGAAGGAGACTTGTTCCTTAATGGAGCACAGCCAGGGCCAATGACTGAGAACATTGGATGCAACATTTTTCATCCTAGTGAGCACTATCCCACTTGGACAGTGGAATCTCCCACAGATGAATTGAAGCATGTTCTTCAGCACTGCATTGGATGGCAATCTGTAATGAGGCCAACAGATCAAGTAGTTTGCGCAGAATAG 1158 0.4387 MGNSHGHHKHRNSLPHNTPTSSPYKYGTQKEPNNPFQTQLTQGNSNNNNNNNMISLLPYAHVDSTLRALAGQAEGFGRFAVGGLHGPLYHVMNLADDGPGSLRDACRRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDAIQIKPNSKHIWIDRCSLSDFDDGLIDITQGSTDITISRCHFSKHDKTILIGADPSHVGDRCMKVTIHHCFFDETRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIFSQHNIYEAGQKKMAFKYISEKATNRGMEVTGHVRSEGDLFLNGAQPGPMTENIGCNIFHPSEHYPTWTVESPTDELKHVLQHCIGWQSVMRPTDQVVCAE* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0997 385 MobiDBLite consensus disorder prediction 15 49 - -
Aev02g0997 385 PANTHER PECTATE LYASE 51 377 - -
Aev02g0997 385 SUPERFAMILY Pectin lyase-like 70 377 IPR011050 -
Aev02g0997 385 SMART amb_all 99 297 IPR002022 -
Aev02g0997 385 Gene3D - 58 363 IPR012334 -
Aev02g0997 385 Pfam Pectate lyase 128 290 IPR002022 -
Aev02g0997 385 MobiDBLite consensus disorder prediction 1 49 - -
Aev02g0997 385 PRINTS Pollen allergen Amb family signature 274 293 IPR018082 -
Aev02g0997 385 PRINTS Pollen allergen Amb family signature 72 89 IPR018082 -
Aev02g0997 385 PRINTS Pollen allergen Amb family signature 127 143 IPR018082 -
Aev02g0997 385 PANTHER PECTATE LYASE 18-RELATED 51 377 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0997 Aev-Chr2 9217152 9223217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0997 94 382 Polysaccharide Lyase AT3G55140 75.433 5.39e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0997 K01728 - tcc:18597629 609.757