Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0942 ATGTCTATAGGTGACCACACATCCATCACTGACCTCATTGGTGGCACTTTTAATGATAAGATTTTGGTGAGGATTAGCAGATTGTGGGAGTCAGTTCCTAAAGATTCAAAAGTCGTTACTTCATTGAACATGACTGTTTTTGACGAAAAGAAATTTAAGATCCAGGCTGCAATTCATAAAAGGGATTTGATTGTTAGACATCAGGCTGCAATTGAAGACAAGCCTGGCCAGTCCTTAGTTGATGTCATTGGTGCAATGACTACATGCGGAGATATTAGGAACTATCAATACTACGGTATTGCTGGCCAGATCCTGGACTTCACACTTGAAAATGAATATGGTGAAACTCTGAAATGTAGTATATTTGATCCTTTGGCACAAGAAATATATGATTATGTCATCAGTCATGAAGGGCCCATCATAACTATTATTGAATTGGGAAGAATGAAAATTTTCCGTGATGAAATGCAAATTAATAGCTCATGGAATGCAACTAAGGTTCACCTGAATCTAGAAATTGATGAAGTCAAAAATTTCCCAAACAGGCCTACTATGAAGATCTGCCAAAGTACGTCCTCAACTACCCAGCTGAATGGTTCTATGACAACTTCATTTATAGAGACACTTGGCCCAGACAACACCAAGACAATCCAGGAGATTTTGGACATTACACAACCAGGGAAATATATTGTTCAAGCAACTATTGCAGTCATTAACCTGAATTCTAACTGGTACTATGAATCATGCAATTCATGTCACAAGAAAACTGACGTCAAGAGCGGAGTTCCATTTTGTGGACATTGTAACAAACAACCTAGTGCTCTGATAGCAAGGTATATGACACACATTTCAGTGGAAGACGGGACAGCAGAAGCTGTGTTTCTCTTCTTTGATGATATTGGTTTTAAATTGGTCAAGAGGACTGCTTATGATTTACGGAAACAACAAGCAGCAGTTAGTTTTAATAATCTTTGTGAAGAATATGGATTCCCTAAAGAGTTGGATGAGTTAGTAGGCAGAAAATTGACATTTTGTATTGAAGTGAATGAATTCTACAATTTGACCAAAAAATCCAAGACATACACTATCATAGAAGTCATGGACACCAATCTAATTGGTCAATCTGGAACTGTGCATTCAGAAACTCCTCCAAGTGTCAAGTGGCCAGATAAAGCGAATGTACAGAATGTTATTTCCAATACGAATTCAGTTGCTCTTTCCTCAATTGCATCTCCAATGCTTGGCCAGCCTTGCCAAAATTCCACGAAAATGGAATCTATTGGGCCTACAATATCTACTGCTATCAGTCTCAATAAGGGAAAAAGAAAAGTTTATACTGATGGACTTTCAAACATTGACGAATTTCAAACAAACCTCACTGAAGCTCTTAATAGTGCAACCGACACTGCAAATTTGTCTGATGATGAAGTAGAAACCTTCATTCGCACTCTTAAAACTGCAAAGAAGAAGCACACAGTTAGCAGTGATGATGAAAATCTTAGTACTTTGATAAGAAAAAAGGTGCTTAAAAAGGCCAAAGGTGGGAAAAAAACATAA 1557 0.3764 MSIGDHTSITDLIGGTFNDKILVRISRLWESVPKDSKVVTSLNMTVFDEKKFKIQAAIHKRDLIVRHQAAIEDKPGQSLVDVIGAMTTCGDIRNYQYYGIAGQILDFTLENEYGETLKCSIFDPLAQEIYDYVISHEGPIITIIELGRMKIFRDEMQINSSWNATKVHLNLEIDEVKNFPNRPTMKICQSTSSTTQLNGSMTTSFIETLGPDNTKTIQEILDITQPGKYIVQATIAVINLNSNWYYESCNSCHKKTDVKSGVPFCGHCNKQPSALIARYMTHISVEDGTAEAVFLFFDDIGFKLVKRTAYDLRKQQAAVSFNNLCEEYGFPKELDELVGRKLTFCIEVNEFYNLTKKSKTYTIIEVMDTNLIGQSGTVHSETPPSVKWPDKANVQNVISNTNSVALSSIASPMLGQPCQNSTKMESIGPTISTAISLNKGKRKVYTDGLSNIDEFQTNLTEALNSATDTANLSDDEVETFIRTLKTAKKKHTVSSDDENLSTLIRKKVLKKAKGGKKT* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0942 518 CDD RPA1_DBD_C 217 366 IPR013955 -
Aev02g0942 518 PANTHER BNAA04G12470D PROTEIN 116 383 - -
Aev02g0942 518 SUPERFAMILY Nucleic acid-binding proteins 213 371 IPR012340 -
Aev02g0942 518 SUPERFAMILY Nucleic acid-binding proteins 71 182 IPR012340 -
Aev02g0942 518 Gene3D - 64 187 IPR012340 -
Aev02g0942 518 CDD RPA1_DBD_B_like 81 179 - -
Aev02g0942 518 Pfam Replication factor-A C terminal domain 230 370 IPR013955 -
Aev02g0942 518 PANTHER REPLICATION FACTOR A 1, RFA1 116 383 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev02g0942 518 Gene3D - 206 378 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0942 Aev-Chr2 8460079 8462874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0942 77 359 Core DNA Replication Machinery Family AT5G08020 25.325 8.02e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0942 - - cqi:110701568 117.857