Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0924 ATGCCAAACATGACTGCTACAGCTGCTGCAGGCATAGCATCCTTGTTCTCATGTTCTTCCATCAAATCTCTCCGTTCCAAGAACACCAACAATAACATCTCCACAGACCGCACATTTTTATTATCACCATCAGTCTCACAAACTCACTATCTTCTGGAACCTTTGTCCATTACACACAAGTTGTGGGTTCCTAGAACTTCAGCTGCTGTTGCTCAGGAAGAAGCGGTGGTAGTTGCTCATCAAGTTGATGAACTGATAGGTGAAGAAGAGAAGAGAGAGGAATTGGAAGATGTTTCACAAGAACCACAAGAAGACGCTTATAATGATAATGATGATGATTCCTCTGCCAGTACTAAGCTCTATTTTGGGAATTTGCCTTATAGTGTTGATAGTGCACAACTTGCTGGGCTAATTCAGGATTATGGCAGCGCAGAACTAATTGAGGTTCTTTATGACAGGGAAAGTGGAAAAAGCAGAGGCTTTGCATTTGTCACAATGAGCTGTATTGAAGATTGTAATACAGTAATAGAAAATCTTGATGGAAAAGAGTTCTTGGGGCGAACCTTGCGCGTGAATTTCTCTAACAAACCGAAACCAAAAGAACCACTGTACCCTGAAACTGAACACAAGCTTTTCGTTGGGAACTTATCATGGTCAGTAACTTCGGAGAGTCTGACAGAAGCGTTTCAAGAGTATGGAAACGTAATTGGGGCTAGGGTCTTGTATGATGGTGAAACTGGAAGGTCACGTGGCTATGGCTTCGTATGCTTCTCAACAAGATCAGAAATGGAATCTGCCCTTGCATCCCTCAACGATGTGGAGCTAGAAGGACGAGCAATGCGTGTAAGCTTGGCTCAAGGAAAACGTTCACAAGAGTAA 879 0.4289 MPNMTATAAAGIASLFSCSSIKSLRSKNTNNNISTDRTFLLSPSVSQTHYLLEPLSITHKLWVPRTSAAVAQEEAVVVAHQVDELIGEEEKREELEDVSQEPQEDAYNDNDDDSSASTKLYFGNLPYSVDSAQLAGLIQDYGSAELIEVLYDRESGKSRGFAFVTMSCIEDCNTVIENLDGKEFLGRTLRVNFSNKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFQEYGNVIGARVLYDGETGRSRGYGFVCFSTRSEMESALASLNDVELEGRAMRVSLAQGKRSQE* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0924 292 MobiDBLite consensus disorder prediction 88 114 - -
Aev02g0924 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 211 280 IPR000504 GO:0003723
Aev02g0924 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 120 190 IPR000504 GO:0003723
Aev02g0924 292 SUPERFAMILY RNA-binding domain, RBD 202 289 IPR035979 GO:0003676
Aev02g0924 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 209 287 IPR000504 GO:0003723
Aev02g0924 292 PANTHER TRANSFORMER-2-RELATED 91 157 - -
Aev02g0924 292 Gene3D - 71 199 IPR012677 -
Aev02g0924 292 PANTHER TRANSFORMER-2-RELATED 200 290 - -
Aev02g0924 292 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 200 290 - -
Aev02g0924 292 Gene3D - 200 292 IPR012677 -
Aev02g0924 292 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 154 194 - -
Aev02g0924 292 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 91 157 - -
Aev02g0924 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 118 196 IPR000504 GO:0003723
Aev02g0924 292 SUPERFAMILY RNA-binding domain, RBD 111 200 IPR035979 GO:0003676
Aev02g0924 292 SMART rrm1_1 119 192 IPR000504 GO:0003723
Aev02g0924 292 SMART rrm1_1 210 283 IPR000504 GO:0003723
Aev02g0924 292 PANTHER TRANSFORMER-2-RELATED 154 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0924 Aev-Chr2 8285116 8289296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0924 110 288 Eukaryotic Initiation Factors Gene Family AT3G16380 32.353 1.07e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0924 - - gmx:100801829 383.645