Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0827 ATGCAGTTCCTACGCTCGGGGGAGCTGTTAGGAGGAGCTGATGAAATGGTTCCTTCATCTGAGTCCCTTGCAACCAATGATTGTTCAGCAAGTGGTCACTCTTTCCTAACTGAACACGTTGACAACAAGAAGCTGGACACCGGCAACATAGAAGAAGCTGAATCATCGCTGCGTGAGAGTGGTGTCTTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGAAATCTAGTAGCTGCGTTACATGTCTTTGAAGGAATAGATATAGGTGCTGTGACTCCCAAGATCAAAGTTGCTCTTTCCAGAAGCAGAGAACGCCGTAAGAGACAGTCCCAGAATTTTGATGAACCGCAAATGTCTATTCATGCTGTTGCCTTATTATTGGAAGCTGTCTTCCTAAAAGCAAAATCTTTGCAGGTTCTTGGAAGGTTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTGGAATCTTCATTGCCTGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTGCAAGAGACTCTGAGCAAGGCAGCTGAGCTGCTTCCGGAACTATGGAAACTTGCTGACTGTCCGCGTGAAGCTATTTTGTCTTACCGGCGAGCACTCCTTCATCAGTGGAATCTTGATGCGGAAACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTATATAGTGGAGGGGAAGCAATGCCCCCTGACCTAAGATCCCAAATGGACGGATCATTTGTACCCAGAAATAATGTTGAAGAGGCTATACTACTTTTAATGATTTTGCTAAGAAAAGTCTCTCTCAATAGAATTGAGTGGGATCCTTCTATTTTAGACCACCTATCATTTGCTCTGTCTGTTTCAGGAGATTTAACAGTTTTAGCCAATCAGTTAGAAGAATTGCTTCCTGCAATTATCCATCGAAAGGAGAGGTACTATGCTTTAGCTCTTTGTTATTATGGAGCAGGTAAGAACTTGGTAGCGCTTGATCTTCTTAGAAAATTGTTGAGCCGTAAAGGGGACCCGAAACATATTCCAGGTTTGTTAATGGCTTCTAAGATTTGCTGTGAGAACTCTAGTCTAGCTGAACAAGGGGCAAGCTTTGCTCGCAGGGTGCTTGAGAACTTGGACGGCCGGTGTAATCAGTTCAAAAATCTGGCCAATTGCTTACTTGGTGTTTCACTTTCAATATACTCAAAATTGGCAATTTCTGATTCTGAGAGGGTTAAGAGGCAATCTGAGGCACTTCATGCCCTCGAAACTGCAGGCAAAATGACAGGAATGAAAGACCCGCTTGTACTATACCATCTCAGTTTAGAAAATGCAGAGCAAAGGAAGTTGGATGCTGCACTTTATTATGCTAAGTGCTATATCAAACTGGAAGGTGGTTCTAATGTTAAAGGATGGTTGTTGTTAGCCCGGATATTATCTGGTCAAAAACGGTTCTTGGATGCTGAATCTATTATCAATGCTGCTCTGGATCAGTCTGGGAAATGGGATCAATGTGATTTGTTGCGGACAAAAGCTAAACTTCAAATTGCCCAGGACCAGTTAAAAAGTGCCATTGAGACATATACTCAGCTTCTAGCTGTTCTTCAAGTTCAAAGTAAAAGTTTTGGTTCTGGGAAGAAGCTATTCAAGGACAAAAGAGAACATGTTAGGAACTTGGAAGTGGAAGTGTGGCATGATCTTGCTAATGTATACATCAGTCTTTCACAATGGCGTGATGCAGAGGCCTGCCTTTCAAAATGGAAGACCATCAAACTGTACTCTGCTTCTAGATGCCATGCAATAGGTATAATGTACGAGGCGAAGGGCCTTCACAAAGAGGCTCTAAAAGTATTTCGAGATGCTTTGGACATTGATCCTGGCCACGTCCCCAGTTTAATCTCGACCGCCGTAGTTCTTAGACGTTGCAGTAATCAAGCGAATCCTGCGGTGAAAAGCTTTCTAATGGACGCGTTGCGGCATGACAGATTTTGTGCTTCTGCTTGGTACAATCTTGGCCTTGTTCACAAAACTGAGGGTACAGCTACTTCATTAGTTGAAGCTGCTGAGTGTTTTCAGGCAGCACATTTTCTTGAAGAATCTGCACCAGTTGAACCTTTCAGATGA 2142 0.4267 MQFLRSGELLGGADEMVPSSESLATNDCSASGHSFLTEHVDNKKLDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNLVAALHVFEGIDIGAVTPKIKVALSRSRERRKRQSQNFDEPQMSIHAVALLLEAVFLKAKSLQVLGRFKEAAQSCKVILDIVESSLPEGLPDNFGAECKLQETLSKAAELLPELWKLADCPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEAMPPDLRSQMDGSFVPRNNVEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSVSGDLTVLANQLEELLPAIIHRKERYYALALCYYGAGKNLVALDLLRKLLSRKGDPKHIPGLLMASKICCENSSLAEQGASFARRVLENLDGRCNQFKNLANCLLGVSLSIYSKLAISDSERVKRQSEALHALETAGKMTGMKDPLVLYHLSLENAEQRKLDAALYYAKCYIKLEGGSNVKGWLLLARILSGQKRFLDAESIINAALDQSGKWDQCDLLRTKAKLQIAQDQLKSAIETYTQLLAVLQVQSKSFGSGKKLFKDKREHVRNLEVEVWHDLANVYISLSQWRDAEACLSKWKTIKLYSASRCHAIGIMYEAKGLHKEALKVFRDALDIDPGHVPSLISTAVVLRRCSNQANPAVKSFLMDALRHDRFCASAWYNLGLVHKTEGTATSLVEAAECFQAAHFLEESAPVEPFR* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0827 713 PANTHER PROTEIN NPGR2 1 713 - -
Aev02g0827 713 SUPERFAMILY TPR-like 308 505 IPR011990 GO:0005515
Aev02g0827 713 ProSiteProfiles TPR repeat profile. 601 634 IPR019734 GO:0005515
Aev02g0827 713 Pfam Tetratricopeptide repeat 602 633 IPR019734 GO:0005515
Aev02g0827 713 PANTHER PROTEIN NPG1 1 713 IPR043376 -
Aev02g0827 713 Coils Coil 513 533 - -
Aev02g0827 713 Gene3D Tetratricopeptide repeat domain 552 708 IPR011990 GO:0005515
Aev02g0827 713 SUPERFAMILY TPR-like 510 684 IPR011990 GO:0005515
Aev02g0827 713 Gene3D Tetratricopeptide repeat domain 104 548 IPR011990 GO:0005515
Aev02g0827 713 SMART tpr_5 133 166 IPR019734 GO:0005515
Aev02g0827 713 SMART tpr_5 475 508 IPR019734 GO:0005515
Aev02g0827 713 SMART tpr_5 511 544 IPR019734 GO:0005515
Aev02g0827 713 SMART tpr_5 601 634 IPR019734 GO:0005515
Aev02g0827 713 SMART tpr_5 671 707 IPR019734 GO:0005515
Aev02g0827 713 SMART tpr_5 567 600 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0827 Aev-Chr2 7153223 7160777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0827 1 713 Calmodulin-binding Proteins AT4G28600 58.425 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0827 K21843 - gmx:100800762 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0827 02 7153223 7160777 Aev06g0110 06 900026 903906 PCT