LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g0821	ATGGATCATGTGGTTGGTGGAAAGTTTAAACTTGGAAGGAAAATTGGGAGTGGCTCTTTTGGGGAGCTATTTATATCTGTTAATGTACAAACTGGAGAGGAGGTGGCTATTAAGTTGGAACCTGCAAAGACTAGGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTGAAGTGGTTTGGAGTTGAGGGAGACTACAATATCATGGTTATTGACCTTCTTGGACCGAGTCTGGAAGATTTATTCAATTATTGCAACCGGAAGTTCTCATTGAAGACAGTGTTGATGCTTGCCGATCAATTAATTAACAGAGTTGAATATATGCACTCAAGAGGTTTCCTTCACCGTGACATCAAGCCAGACAATTTTCTAATGGGCCTAGGCCGCAAAGCAAATCAGGTGTACGTCATTGACTACGGGCTTGCCAAAAAGTATAGGGATCTTCAAACTCATAGGCACATACCATACAGAGAAAACAAGAATCTTACTGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAAAGGAAGTCTTCCCTGGCAGGGACTAAGGGCTGGCAACAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGGTGTCAACTTCAATAGAGGTGCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTTCACTACTGCCGATCATTGCGGTTTGAGGACAAGCCGGATTATTCATATTTAAAGAGACTTTTCCGTGACCTATTTATTCGAGAAGGCTATCAATTTGACTATATTTTTGACTGGACTATATTGAAGTATCCACATATCAGTGGCACCTCTAGAGGGAGGAATGGCACTGGCAAGGCAGCTATGAATTTTGGTCAACCTGTACAAAAACCGGAAAAGATGTCAGTTGGGAAAGAAATCCGAGAGAAATTCTCCGGTGCTGTTGAAGCGTTCACCCGAAAGAACCCCATTTCTGCTAGTCCACGCGTGGATCACATGAGATATAGGTCTTCTGAGGACGTACCAGTAGTACACAAGGAAACGCACCATGCCCAATACAATTCCACTAGATTTGCCAGCAGTTCAAGAAAGGCCGTAGCTGAATCAGGCGACTATGTTGGGATGACCCCGAGCAGGGGTCAACACGTTGGGATGACCCCGAGTAGAGGTCATAACGTTGGGATGACCCCGACTAGAGGTCATCATGTTGGGATGACCCCAAGCAGGGGCCATCCAACTACCGCACATCGAGTTCAACCCGTGTACGAGACCAAACCATCAAATTATATTCGCAACGGGTCTACAAGACGCCACCGTGAGGATCCTCTGAGTAGCTTCGAGCTCCTTAACATCAGGAAGTAA	1434	0.4449	MDHVVGGKFKLGRKIGSGSFGELFISVNVQTGEEVAIKLEPAKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNIMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLKGSLPWQGLRAGNKKQKYDKISEKKVSTSIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTILKYPHISGTSRGRNGTGKAAMNFGQPVQKPEKMSVGKEIREKFSGAVEAFTRKNPISASPRVDHMRYRSSEDVPVVHKETHHAQYNSTRFASSSRKAVAESGDYVGMTPSRGQHVGMTPSRGHNVGMTPTRGHHVGMTPSRGHPTTAHRVQPVYETKPSNYIRNGSTRRHREDPLSSFELLNIRK*	478

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev02g0821	477	ProSiteProfiles	Protein kinase domain profile.	9	278	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev02g0821	477	MobiDBLite	consensus disorder prediction	426	465	-	-
Aev02g0821	477	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	124	136	IPR008271	GO:0004672\|GO:0006468
Aev02g0821	477	Pfam	Protein kinase domain	10	227	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev02g0821	477	PANTHER	CASEIN KINASE-RELATED	1	405	-	-
Aev02g0821	477	SUPERFAMILY	Protein kinase-like (PK-like)	4	290	IPR011009	-
Aev02g0821	477	PANTHER	CASEIN KINASE I-LIKE PROTEIN	1	405	-	-
Aev02g0821	477	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
Aev02g0821	477	SMART	serkin_6	9	287	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev02g0821	477	Gene3D	Transferase(Phosphotransferase) domain 1	1	335	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g0821	Aev-Chr2	7097143	7102227	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev02g0821	8	213	MAP Kinase Kinase Kinase	AT3G06030	25.463	7.64e-13	68.9

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Aev02g0821		Pkinase	2e-24	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g0821	K08960		-	gmx:100789031	763.451

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev02g0821	02	7097143	7102227	Aev02g0821	02	7097143	7102227	ECH
	Aev06g0102	06	853939	858716	Aev02g0821	02	7097143	7102227	PCT

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