Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0817 ATGGATCCAGGGAGGCTAGTTGAGTTCGATGATGGCGCTAGGTCTGTCGATTCCGTTGCATGCGATATAAATTCGATGGAGGAGGAGCAGGATCGGATTTTGCTTACCAGTTTGGGCGTGAAGTCTGCGAATCCTGAAGATATTGAACGCGACGTGTTGGAAAAGGCAACGAATGATGCAACGACTGTAACTGAAGGAGAAGGCTGTGCCAAGGAAGAAGATTCTGGTGTAGCTGGAAATGTTGATCCATCATCTGCTGGTAAAGCAGAGCTTAGTCAGAGGCTGAGGGCTGTGGAATTTGAAATCAATGCAGTAGCATCCACCATTCAGCAGTTGAAAAGTGTTGAGAATGAATGTGGTGGTGCTAGCGAGGATGGCCGGGAGCAAAGGGTTGCTGAGGGTGGTTCCTCCAATGATTCAAACCTTCAGCTCGTTCTTGCTGATGATAGGCTACAGAGCCTGAGGAAAACAAAGGCTCAATTAGAGAAAGAGCTTTCATTGTTGTGTAAGGATGATGCTTCCAAAAATGCTGAGCGGGAAAAGGTGATTTTTGATTTAGTTAAGGAAGAGAGACGATCCAAGAGGAAAGTTAAAGAAGATAAAAAACTACAGAAAAGCTCAGGGAAGAGGCATAAGATAGTCTCATTCAATGATGATGTTGATTTTGATGCTGTTTTGGATGCAGCCTCTGCGGGCTTTGTCGAAACTGAGAGGGATGAGTTGGTGAGAAAAGGAGTTTTAACCCCTTTTCATAAGTTGAAAGGCTTTGAGCGCCGCTATCAACAATCTGAAACATCAAGTAGTCATAATGCAGCCGAAGAAGCAAGTACTAGTGATCTTGCTTCATCCAGTGTTGAAAGAGCTGCTAGATCAATATCTGAGGCAGCAAGAGCTCGCCCAACCACCAAGCTGCTTGAGCATGATGCAGTTCCAAAGCTTGATGCTCCCACTTTTCCGTTTCAAAGGCTCAAGAAACCACTTAAAGTTCCCGACAGATTGGGAGAACAAAATAAAGATTCAAAGAGGAAAAAGAGGAGGCCTGCACCTGGTAGGAAATGGACCAAGCGTGTTTCTTGTGAGGATATAAATCCTGAAGAAAGTGAAAATGCAACTGGTTGCTTGGACACTTCCAGCTGTGAAAATTTAGAGGCACAAGATGTTGAACTTTCTGATCATGAATCTTCTTATGTAACATTAGAAGGTGGGTTAAAAGTCCCTGATAGAATTTTTGAAGCACTGTTTGACTATCAAAAGGTTGGTGTTCAATGGATGTGGGAATTGCATTGTCAGAGAGCTGGTGGAATTATTGGTGATGAAATGGGTCTTGGTAAAACTGTCCAGGTCTTATCTTTTCTTGGAGCATTGCATTTTAGTGGCATGTACAAACCCAGCATTGTTATCTGCCCCGTTACACTCTTGAGACAATGGAAAAGGGAAGCTAAAAAGTGGTACCCGAAATTCCATGTAGAGCTTTTACATGATTCTGCTCAGGATTCTGTTCCTAGAAAGAAGAAAGCACAATTTGACGAATCAGACTATGAAAGTGATATTTCAAATGACAATGATGGTGAGAGAAGTGCACCGTCTAGAAATACAAGAAAATGGGAATCCCTAATAAATCGTGTTCTGAGATCAGAATCTGGACTACTTATCACCACTTATGAGCAGCTCAGAATATTAGGGGACCAGTTGCTTGACATTGAATGGGGGTATGCTGTACTTGATGAAGGACATAGAATAAGAAATCCTAATGCTGAAATTACCCTAGTTTGTAAGCAGCTACAAACTGTACACCGCATTATAATGACAGGCGCACCAATTCAGAACAAACTCACAGAACTATGGTCATTGTTTGATTTTGTTTTTCCTGGAAAATTGGGTGTTTTGCCTGTATTTGAAGCTGAGTTTTCAGTTCCTATAGCAGTTGGTGGATATGCAAATGCTTCACCATTACAAGTATCCACAGCATACAGGTGTGCTGTGGTGCTGCGCGATTTAATCATGCCTTACCTTCTCCGACGAATGAAGGCTGATGTGAATGCCCAACTTCCAAAGAAAACTGAGCATGTTCTATTCTGCAGCCTTACATCAGAGCAAGTATCTGCATATAGAGCATTTTTAGCAAGTACAGAAGTGGAGCAAATATTGGATGGACACAAGAATTCCCTTTATGGAATTGATGTTATGCGCAAGATCTGCAATCATCCTGACCTACTTGAAAGAGATCATGCCTTGGCGAATCCAGATTATGGAAATCTAGAACGTAGTGGGAAAATGAAAGTTGTAGCACAAGTACTTGATGTTTGGAAGGAACAGGGTCACCGTGTTCTTCTTTTTACTCAAACCCAACAAATGCTTGACATTTTTGAGAACTTCTTAATGAATTCTGGCCATATTTACCGAAGAATGGATGGTCTCACTCCTGTTAAACAGAGAATGGCTTTAATAGATGAATTTAATGCCTCAAGTGAGATATTTGTTTTTATTTTAACAACCAAAGTTGGGGGCTTGGGGACAAATCTTACTGGTGCAGACAGGGTGATCATCTTTGACCCTGATTGGAATCCTTCAACTGATATGCAGGCCAGAGAGCGTGCTTGGCGTATTGGTCAGAAACGGGATGTTACAGTGTATAGGTTGATCACTCGGGGAACTATAGAGGAGAAAGTGTATCACCGTCAGATTTACAAGCATTTTCTTACAAATAAAATACTGAAGAACCCACAGCAGAAAAGGTTCTTTAAAGCCCGGGATATGAAAGATCTATTCGTTCTGAATGTGGATGGAGAAACCGGGTCTACTGAAACATCAAATATTTTCAGTCAAATATCTGAAGTGGCGAATATTGTTGGGACACATAAAGAAAACGAGGAGAAGCATAAACTTAGCCCAACTGCTGAACCAGGTTCTGAAGATGTTGCATCTGGTAATGATGACGAATCACAGAGAGGATCTTCAAGGGGCAAGGGGAAAGAGAAAGTTGAACATAGCGAAGGGGTTGACGAGGAAACAAATATATTGAGAAGCCTTTTTGATGCCAATGGGATACATAGTGCCTTGAACCATGATATGATCATGAATGCCCATGATGAGGAGAAGATGAGGCTTGAGGAGCAAGCTTCCAAGGTTGCACAAAGAGCCGCAGAAGCTTTACGCCAGTCGCGAATGCTCCGGAGCAATGACAGCATCTCTGTCCCAACATGGACCGGAAGGTCAGGAACTGCCGGTGCTCCATCATCTGTTCGGCGGAAGTTTGGTTCAACTGTGAATACCCAACTAGTAAATAATTCCAAGGCATCCAATGAATCACCCAGCAAAGGGACTAACAAATTCAATGGAATTGCCGCTGGAGCATCTTCTGGTAAGGCATTATCTTCTGCTGAACTTTTGGCTCGGATTCAAGGTAACCAAGAAAAAGCCATCGGTGCTGGGCTTGATCAACAGTTCGGCACGGTCTCTAGTTCCACTAATCAAGCAAGATCTATGAATGGTAGATCTTCTAGGGCTCCTGAAAATTCATCTGGAGTACAACCTGAAGTATTGATTCGACAAATCTGCACCTTTCTACAACAGCGAGGTGGTAGTTCTAGTTCAGCCAGCATAGTTCAGTATTTCAGGGATAGGATACCCTCAAACGATCTTGCTCTGTTCAAGAATCTGTTAAAGGAAATTGCAACTCTGCAGAAAGGACCAAGCGGATCAAATTGGAGTCTAAAGCCAGATTACCAATGA 3732 0.4258 MDPGRLVEFDDGARSVDSVACDINSMEEEQDRILLTSLGVKSANPEDIERDVLEKATNDATTVTEGEGCAKEEDSGVAGNVDPSSAGKAELSQRLRAVEFEINAVASTIQQLKSVENECGGASEDGREQRVAEGGSSNDSNLQLVLADDRLQSLRKTKAQLEKELSLLCKDDASKNAEREKVIFDLVKEERRSKRKVKEDKKLQKSSGKRHKIVSFNDDVDFDAVLDAASAGFVETERDELVRKGVLTPFHKLKGFERRYQQSETSSSHNAAEEASTSDLASSSVERAARSISEAARARPTTKLLEHDAVPKLDAPTFPFQRLKKPLKVPDRLGEQNKDSKRKKRRPAPGRKWTKRVSCEDINPEESENATGCLDTSSCENLEAQDVELSDHESSYVTLEGGLKVPDRIFEALFDYQKVGVQWMWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGMYKPSIVICPVTLLRQWKREAKKWYPKFHVELLHDSAQDSVPRKKKAQFDESDYESDISNDNDGERSAPSRNTRKWESLINRVLRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPIAVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTSEQVSAYRAFLASTEVEQILDGHKNSLYGIDVMRKICNHPDLLERDHALANPDYGNLERSGKMKVVAQVLDVWKEQGHRVLLFTQTQQMLDIFENFLMNSGHIYRRMDGLTPVKQRMALIDEFNASSEIFVFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFVLNVDGETGSTETSNIFSQISEVANIVGTHKENEEKHKLSPTAEPGSEDVASGNDDESQRGSSRGKGKEKVEHSEGVDEETNILRSLFDANGIHSALNHDMIMNAHDEEKMRLEEQASKVAQRAAEALRQSRMLRSNDSISVPTWTGRSGTAGAPSSVRRKFGSTVNTQLVNNSKASNESPSKGTNKFNGIAAGASSGKALSSAELLARIQGNQEKAIGAGLDQQFGTVSSSTNQARSMNGRSSRAPENSSGVQPEVLIRQICTFLQQRGGSSSSASIVQYFRDRIPSNDLALFKNLLKEIATLQKGPSGSNWSLKPDYQ* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0817 1243 MobiDBLite consensus disorder prediction 324 359 - -
Aev02g0817 1243 Coils Coil 1026 1053 - -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 976 1001 - -
Aev02g0817 1243 Pfam Helicase conserved C-terminal domain 763 870 IPR001650 -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 55 85 - -
Aev02g0817 1243 CDD SF2_C_SNF 756 881 - -
Aev02g0817 1243 SMART ultradead3 409 641 IPR014001 -
Aev02g0817 1243 Pfam SNF2-related domain 416 738 IPR000330 GO:0005524|GO:0140658
Aev02g0817 1243 MobiDBLite consensus disorder prediction 1063 1111 - -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 118 139 - -
Aev02g0817 1243 Coils Coil 144 171 - -
Aev02g0817 1243 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED 273 1110 - -
Aev02g0817 1243 Gene3D - 381 673 IPR038718 -
Aev02g0817 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 930 IPR027417 -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 502 530 - -
Aev02g0817 1243 CDD DEXHc_ERCC6 413 623 - -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 955 1001 - -
Aev02g0817 1243 SMART helicmild6 787 870 IPR001650 -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 325 342 - -
Aev02g0817 1243 Gene3D - 680 965 IPR027417 -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 260 289 - -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 1151 1176 - -
Aev02g0817 1243 PANTHER SNF2/RAD54 FAMILY MEMBER 273 1110 - -
Aev02g0817 1243 MobiDBLite consensus disorder prediction 258 300 - -
Aev02g0817 1243 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 425 624 IPR014001 -
Aev02g0817 1243 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 761 920 IPR001650 -
Aev02g0817 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 674 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0817 Aev-Chr2 7048212 7054957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0817 752 923 RAD5 or RAD16-like Gene Family AT5G22750 31.977 1.66e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev02g0817 SNF2_N 2.4e-61 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0817 K10841 - gmx:100820025 1977.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0817 02 7048212 7054957 Aev02g0817 02 7048212 7054957 ECH