Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0811 ATGGGTCTAAGAGATATTGGTGCTTCACTCCCTCCTGGATTTAGGTTCTATCCAAGTGATGAAGAATTGGTTCTTCACTACCTTTACAAGAAGATCACAAATGAGGAAGTTCTTAAGGGTACCTTGATGGAAATTGATTTGCACATATGTGAACCATGGCAGCTTCCTGAGCTGGCTAAGCTCAACGCAACTGAATGGTACTTCTTCAGCTTCCGTGACCGCAAGTATGCCACCGGGTTCCGCACCAATCGCGCCACGACATCTGGCTACTGGAAAGCCACAGGGAAGGATCGGACGGTTCTCGATCCCATCACCCGCGAGGTCGTAGGGATGAGGAAGACATTGGTGTTCTACAGGAATAGAGCCCCAAATGGAATCAAAACTGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCTAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCACAAAGGAAAAACAGACAATAGTGCCAAACTAAGCCCACAAGAACAACTCATGTTTGATTATGATTCCACAACACCACCTCAATCCCTAACTTTGGCTTCATCATCCCCAACAAATATTAACCAAATTACCAATTTTCATAATAATAATAATGTTGGGTATAACCAACTTGCCACCAATTTCTCATCATCAATGCCAACCACTACTACTACCCATAATCATCATCATAACCAAAACGTGTCTTTTATGAACCTACTTCAATTTTCTAAGGACACAAACACAAATTGTAGCACCGTGACTCAAGTTAGTCCTAAAGGTGATGATGATGATGGGTATGGGTTCATATGGGACATGGACTTTGAAGAAAATAGTTGCTTCCATGATCATGACCATCATCATCATCATGGGGTGGCACCATCATTTGAGGTTGATAATAATAGCATGGTCTTGTTGTAG 918 0.4303 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITNEEVLKGTLMEIDLHICEPWQLPELAKLNATEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKTDNSAKLSPQEQLMFDYDSTTPPQSLTLASSSPTNINQITNFHNNNNVGYNQLATNFSSSMPTTTTTHNHHHNQNVSFMNLLQFSKDTNTNCSTVTQVSPKGDDDDGYGFIWDMDFEENSCFHDHDHHHHHGVAPSFEVDNNSMVLL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0811 305 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Aev02g0811 305 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Aev02g0811 305 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 284 - -
Aev02g0811 305 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Aev02g0811 305 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Aev02g0811 305 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0811 Aev-Chr2 6972448 6979925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0811 6 156 NAC Transcription Factor Family AT1G56010 58.491 1.47e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev02g0811 NAM 1.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0811 - - aip:107625035 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0811 02 6972448 6979925 Aev02g0811 02 6972448 6979925 ECH
Aev06g0099 06 805914 811641 Aev02g0811 02 6972448 6979925 PCT