Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0797 ATGGGAAGAGCACCTTGCTGTGAGAAAATGGGGTTGAAGAGAGGACCATGGACTCCAGAAGAAGATCTTATTCTCATCAATTACATCAACACACATGGTCATAACAATTGGCGTGCACTTCCTAAACAAGCTGGGTTGTTGAGGTGTGGAAAGAGTTGTAGACTCCGGTGGATAAATTATTTGAGGCCCGATATAAAACGTGGAAACTTCACCATTGAAGAAGAGGACACAATAATCAAATTGCATGAAATGATGGGAAATAGGTAA 267 0.412 MGRAPCCEKMGLKRGPWTPEEDLILINYINTHGHNNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTIEEEDTIIKLHEMMGNR* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0797 88 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev02g0797 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 88 - -
Aev02g0797 88 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 88 IPR017930 -
Aev02g0797 88 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev02g0797 88 CDD SANT 16 61 IPR001005 -
Aev02g0797 88 PANTHER TRANSCRIPTION FACTOR MYB14 1 88 - -
Aev02g0797 88 SMART sant 13 63 IPR001005 -
Aev02g0797 88 Gene3D - 11 67 - -
Aev02g0797 88 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Aev02g0797 88 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0797 Aev-Chr2 6785453 6785840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0797 1 88 MYB Transcription Factor Family AT2G31180 85.227 7.39e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev02g0797 Myb_DNA-binding 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0797 K09422 - gmx:100802214 179.104