Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0789 ATGGATTTTGATTCTTCTTTCTTCCAACAACAAAACATTATTCTCCACTCCACTTCCTCTTCCCTTTCATCAAATTCCTCTTTTTCTTCTAATAATTCAGACCCTTATTATAATTACTCCTTGGAAGACTTTTTCCTCTTCAATGAAGAAGAACACACAACCCTAATTCCCTTCAACTTCATCAATAATGACCATCACCACTCATCACATCAAAAAATCAAGCATGAAAAATCATCTTCCTATGATTCCAATTCCAACTCTTCTTCTCAATTAAGCAATGAATCAATATCACAACAAGAAGTCTCATCCAATTCTTCATCAAGCCAATTAGAAACACACACATCATCACCACCACAAAATGAAAATAGCATCATCAAAGAGAAAAGACCCTATAGGGGTGTGAGGAGAAGGCCATGGGGGAAATTTGCAGCTGAAATTAGGGACTCAACAAGAAATGGTGTGAGAGTATGGATTGGAACATTTGATACAGCTGAAGCAGCTGCTTTAGCTTATGATCAAGCAGCTTTATCCACAAGAGGATCCATGGCAATTCTCAATTTCCCAGAAGAAGTTGTGAGAGAATCACTCAATGAAATGGCCAATAATAATAATAATAAGCCCTGTTTTGAAGATGGGTTTTCCCCTGTTTTGGCACTCAAGAGGAAACACACTATGAGAAGAAAGTCCAAAGCTAGCAACAACAACAACAAGAAGGTCAAAAGGGATGTTAGGGAAATAGAGATCCTTTCACAAAATGTATTGGTGTTGGAAGATTTGGGTTCTGAGTATCTTGAGCAACTTCTGAGCTTGAGTACTTCATCTGAAGCCATCTGCTAG 837 0.3787 MDFDSSFFQQQNIILHSTSSSLSSNSSFSSNNSDPYYNYSLEDFFLFNEEEHTTLIPFNFINNDHHHSSHQKIKHEKSSSYDSNSNSSSQLSNESISQQEVSSNSSSSQLETHTSSPPQNENSIIKEKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAILNFPEEVVRESLNEMANNNNNKPCFEDGFSPVLALKRKHTMRRKSKASNNNNKKVKRDVREIEILSQNVLVLEDLGSEYLEQLLSLSTSSEAIC* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0789 278 Pfam AP2 domain 131 180 IPR001471 GO:0003700|GO:0006355
Aev02g0789 278 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 271 - -
Aev02g0789 278 PANTHER DNA-BINDING DOMAIN 21 271 IPR044808 GO:0003700|GO:0009873
Aev02g0789 278 MobiDBLite consensus disorder prediction 80 123 - -
Aev02g0789 278 SMART rav1_2 130 194 IPR001471 GO:0003700|GO:0006355
Aev02g0789 278 CDD AP2 131 189 IPR001471 GO:0003700|GO:0006355
Aev02g0789 278 SUPERFAMILY DNA-binding domain 131 189 IPR016177 GO:0003677
Aev02g0789 278 PRINTS Ethylene responsive element binding protein signature 154 170 IPR001471 GO:0003700|GO:0006355
Aev02g0789 278 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Aev02g0789 278 Gene3D AP2/ERF domain 130 190 IPR036955 GO:0003700|GO:0006355
Aev02g0789 278 ProSiteProfiles AP2/ERF domain profile. 130 188 IPR001471 GO:0003700|GO:0006355
Aev02g0789 278 MobiDBLite consensus disorder prediction 67 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0789 Aev-Chr2 6701965 6702801 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0789 126 274 AP2-EREBP Transcription Factor Family AT3G23240 60.403 2.62e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev02g0789 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0789 K14516 - gmx:100784784 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0789 02 6701965 6702801 Aev02g0789 02 6701965 6702801 ECH
Aev06g0084 06 702122 703003 Aev02g0789 02 6701965 6702801 PCT