Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0784 ATGACCCCAGCCCCTTTCTTCTCCTTTAACCAAGATTGGAACATGTCCAATGATCCTTCAAAAACCCTCATGTTTGATTTCGAATCATCATCATTTTCAAGCTACAATAATAATGCTCATCATCATGATCCTATTCATGATTCCCTTTCCTTTGATATGGTTGACTTCTCTATCGATCCGCAATTAGCAGCAGCATCAACAATATCATCAACAACAATAGACGAAGAAGTTAAAGAGTCAAAGCATGTGCTGAAGAAAAATAGGCCTCAAAAAGATGAAGAAGAAGAACAACTGCGAAAACATAACAACGATGACAATAAGGTAAGGTACATAGGTGTTAGAAAAAGGCCATGGGGAAAATTCGCAGCGGAGATTAGAGACACAACAAGGAATGGAGCAAGAGTTTGGCTTGGAACCTTTGATAGTGCTGAGGATGCTGCTTTAGCTTATGATCAAGCTGCATTCTCCATGAGAGGATTCAACGCCGCTCTTAATTTTTCAGTCAAAACGGTTCAAAAATCTTTGCAAGAGATGGAGTATTATGGTGGTTGCATCAAAGGGTATTCTTCACCAGCACTAGCACTGAAGGAGAAGAACTACATGAGAAGAAAATTGTCATCAAAGGGTAATAAGAATAGTAATAAAGAGAGTGGCAAGAAGCGTACAAGTGAAAGTGATCAAGTTCATCAATCATCAGAGACAGAATCATGTGTGATGGTGCTAGAGGATTTGGGAGTTGAATACCTAGAGGAGCTTCTTAGCATGTTTGATCAAAGTGCAAGCCCTAGCTACTCCTTTTAG 801 0.3958 MTPAPFFSFNQDWNMSNDPSKTLMFDFESSSFSSYNNNAHHHDPIHDSLSFDMVDFSIDPQLAAASTISSTTIDEEVKESKHVLKKNRPQKDEEEEQLRKHNNDDNKVRYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFDSAEDAALAYDQAAFSMRGFNAALNFSVKTVQKSLQEMEYYGGCIKGYSSPALALKEKNYMRRKLSSKGNKNSNKESGKKRTSESDQVHQSSETESCVMVLEDLGVEYLEELLSMFDQSASPSYSF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0784 266 MobiDBLite consensus disorder prediction 203 234 - -
Aev02g0784 266 Pfam AP2 domain 109 159 IPR001471 GO:0003700|GO:0006355
Aev02g0784 266 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Aev02g0784 266 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Aev02g0784 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 35 255 - -
Aev02g0784 266 SMART rav1_2 109 173 IPR001471 GO:0003700|GO:0006355
Aev02g0784 266 CDD AP2 109 166 IPR001471 GO:0003700|GO:0006355
Aev02g0784 266 Gene3D AP2/ERF domain 108 169 IPR036955 GO:0003700|GO:0006355
Aev02g0784 266 SUPERFAMILY DNA-binding domain 109 168 IPR016177 GO:0003677
Aev02g0784 266 ProSiteProfiles AP2/ERF domain profile. 109 167 IPR001471 GO:0003700|GO:0006355
Aev02g0784 266 MobiDBLite consensus disorder prediction 78 103 - -
Aev02g0784 266 PANTHER DNA-BINDING DOMAIN 35 255 IPR044808 GO:0003700|GO:0009873
Aev02g0784 266 MobiDBLite consensus disorder prediction 203 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0784 Aev-Chr2 6623926 6624726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0784 110 253 AP2-EREBP Transcription Factor Family AT3G23240 57.534 1.16e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev02g0784 AP2 2.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0784 K14516 - gmx:100811486 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0784 02 6623926 6624726 Aev02g0784 02 6623926 6624726 ECH
Aev06g0956 06 6461148 6461840 Aev02g0784 02 6623926 6624726 PCT
Aev02g0784 02 6623926 6624726 Aev06g0082 06 688971 689411 PCT