Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0780 ATGGCATTCTTTTTCCTCATTGTTCTTCTCAGCATATTTGCCACTGTTTTCTCACTCATAAGCTACTTAACTTTCTTGACCAAATGCTGCTCAAACTTTCACCAATTCAACCCTCTACGATGGATCTCATCAATCATAAGAAGATCATCATCACAACACAATGAAGATCCCTTCATATCACTATCATTATTCTCTCCAACCGCCGCCGCGTGGCACCGCGGCAGCGGCCTCTGCGAATCCGCCATTAGAGAAATCCCTGCATTTCAATTCACAATAGCAGGGGAAACAATTGTGGATCAGAGTGTTTATTGCTGCATGGTTTGTTTAACAGAGTTTCAGGAACACGACATGCTGAAGATTCTTCCAAATTGTAGCAATGTTTTTCACTTGGATTGCATTGATATTTGGCTACAAAACAATTCAAATTGCCCTCTATGTAGATCTAGCATTTCAGGGGACACCCATTTTCCATTTGATCAAATCATAGCCCCAAGTTCTTCTCCACAGGATTCTCAGATACTTTCTAACATGGATAGTGATGAAGATTTTGTAGTCATTGAACTAGGTGGTGGTGGTGGAGATCAAGAAGAAGAAGAAAGGAATGACACAAGAGAAAGAAGCATTATCTCAGAGAATATTGGGAACTTGAAAGCAAGGAAGTTTGTTCAGAAATATTCCATGATGGGAGATGAGTGTATTGATGTAAGAGAGAAAGATGAAGAGTTCTCTGTTCAGACAATTAGAAGATCTTTTTCAATGGATTCTGCAAATGATAGACAAGTTTATTTGGATGTTCAAGCCATAAGACTACAACAACAACAAAAGAGGAATATTCAGAATGAGGGTAGTGTAAGTGAGGATTGTAATGGAAAAGGAAGAAGATCATTTTTCCCATTTTGTTATGGGAAAGGATCCAAAAATGCAGTGCTTCCTTTGGAGAACTATGTTTAA 951 0.387 MAFFFLIVLLSIFATVFSLISYLTFLTKCCSNFHQFNPLRWISSIIRRSSSQHNEDPFISLSLFSPTAAAWHRGSGLCESAIREIPAFQFTIAGETIVDQSVYCCMVCLTEFQEHDMLKILPNCSNVFHLDCIDIWLQNNSNCPLCRSSISGDTHFPFDQIIAPSSSPQDSQILSNMDSDEDFVVIELGGGGGDQEEEERNDTRERSIISENIGNLKARKFVQKYSMMGDECIDVREKDEEFSVQTIRRSFSMDSANDRQVYLDVQAIRLQQQQKRNIQNEGSVSEDCNGKGRRSFFPFCYGKGSKNAVLPLENYV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0780 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 152 IPR013083 -
Aev02g0780 316 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Aev02g0780 316 PANTHER RING-H2 FINGER PROTEIN ATL16 5 313 IPR044600 GO:0016567|GO:0016740
Aev02g0780 316 Pfam Ring finger domain 105 147 IPR001841 -
Aev02g0780 316 SMART ring_2 105 146 IPR001841 -
Aev02g0780 316 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 313 - -
Aev02g0780 316 SUPERFAMILY RING/U-box 104 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0780 Aev-Chr2 6596062 6597012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0780 7 279 C3H Transcription Factor Family AT1G04360 42.208 1.54e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0780 K19041 - gmx:100809883 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0780 02 6596062 6597012 Aev06g0081 06 684230 685216 PCT