Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0769 ATGACTGGTTCTGGATCACCTTGTGGAGCTTGCAAATTCTTGAGGAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTATTTTTGCCATGAACAAGGAGCTACCCATTTTGCAGCAATTCACAAGGTTTTTGGTGCAAGCAATGTTTCAAAGCTTCTTGCTCACTTACCTGTAAGTGATAGGTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCAAGGCTTCAAGATCCAATTTATGGTTGTGTTTCACATATCTTTGCCCTCCAACAACAGGTGGTAAATCTACAAGCACAACTAGCTTATCTCAAGGAACAAGCAGCCCAAAGTTGTGTCAATGCCTCAGCCAATAATGAAAACCCTAATAATGAGAGATACTTTGATGTGAAGCCTATGGCCAACAATAATAATTTCCAACAAGATCTTCAAAATTGGTTCCATGTGGAAAATTCCAACATGGGGCTAGAAGAAGCTCTTCCCAACTTGTGCAATAATAATAGCAATAATAATAATAATAATTCCTCTGCTTCACAATATGATCATCATGGAACCATGGATCATGAAAGCAATTCATTCTCTAGCTTTGAAGAGAGTTCTTCCAACTCTATGTGTTATGACTCAATTCTCCATTCAGTGGCTTTTGGTTATAGTAGATGA 660 0.3879 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSCVNASANNENPNNERYFDVKPMANNNNFQQDLQNWFHVENSNMGLEEALPNLCNNNSNNNNNNSSASQYDHHGTMDHESNSFSSFEESSSNSMCYDSILHSVAFGYSR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0769 219 Coils Coil 87 107 - -
Aev02g0769 219 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Aev02g0769 219 MobiDBLite consensus disorder prediction 162 194 - -
Aev02g0769 219 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Aev02g0769 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 206 - -
Aev02g0769 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 206 - -
Aev02g0769 219 MobiDBLite consensus disorder prediction 162 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0769 Aev-Chr2 6481961 6483299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0769 7 148 AS2 family AT3G58190 74.126 1.47e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev02g0769 LOB 4.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0769 K13945 - gmx:100776678 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0769 02 6481961 6483299 Aev02g0769 02 6481961 6483299 ECH
Aev06g0076 06 632501 633423 Aev02g0769 02 6481961 6483299 PCT